CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06307	Canola	cytosol	90.91	96.45
AT1G08250.1	Thale cress	plastid	79.43	80.39
GSMUA_Achr8P07590_001	Banana	cytosol	53.35	78.25
CDY30526	Canola	plastid	75.84	75.84
CDY72678	Canola	plastid	75.84	75.66
CDY22692	Canola	plastid	75.12	74.94
CDX77139	Canola	plastid	76.08	74.65
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	72.25	73.48
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	61.48	72.6
KRH22725	Soybean	plastid	72.01	70.99
KRH26581	Soybean	plastid	72.01	70.82
Os09t0565700-01	Rice	plastid	67.22	70.07
Os09t0566050-00	Rice	plastid	67.46	69.29
TraesCS2D01G290000.1	Wheat	plastid	67.7	68.36
TraesCS2B01G308500.1	Wheat	plastid	67.7	68.36
TraesCS2A01G292000.1	Wheat	plastid	67.46	68.12
KRH25168	Soybean	plastid	69.62	67.99
KRH30513	Soybean	plastid	69.14	67.52
TraesCS5B01G372500.1	Wheat	plastid	67.7	67.38
Zm00001d025333_P001	Maize	plastid	67.22	67.06
Zm00001d005351_P001	Maize	plastid	67.7	67.06
TraesCS5A01G370200.1	Wheat	plastid	67.7	67.06
HORVU5Hr1G092190.1	Barley	plastid	68.18	66.9
Zm00001d003830_P001	Maize	plastid	68.18	66.9
TraesCS5D01G379700.1	Wheat	plastid	67.22	66.43
TraesCS2B01G308400.1	Wheat	plastid	65.79	65.63
EER96348	Sorghum	plastid	68.66	65.53
EES10725	Sorghum	plastid	67.7	65.51
TraesCS2D01G289900.2	Wheat	plastid	64.83	65.14
CDX88512	Canola	plastid	19.62	65.08
Os04t0406600-01	Rice	plastid	67.7	64.91
CDX92343	Canola	plastid	65.07	64.0
CDY09152	Canola	plastid	64.83	63.76
CDY26946	Canola	plastid	64.83	63.76
CDY59281	Canola	plastid	64.35	63.29
CDX77841	Canola	plastid	58.13	62.79
GSMUA_Achr3P22810_001	Banana	plastid	58.61	62.66
CDY30932	Canola	plastid	57.42	62.18
GSMUA_Achr10P...	Banana	plastid	30.62	61.54
GSMUA_AchrUn_...	Banana	plastid	57.89	60.8
GSMUA_Achr8P33080_001	Banana	plastid	62.68	60.09
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	65.07	59.13
TraesCS2A01G291900.1	Wheat	plastid	65.07	58.49
CDY28030	Canola	plastid	49.52	55.05
CDY35951	Canola	plastid	49.76	54.88
CDX98196	Canola	extracellular	12.2	54.26
CDX74036	Canola	plastid	47.85	52.77
CDY31213	Canola	mitochondrion	48.09	52.62
CDY21012	Canola	mitochondrion	48.09	52.48
CDY07984	Canola	plastid	47.13	51.98
CDX75178	Canola	cytosol	8.37	50.72
CDY19368	Canola	cytosol	50.0	28.87

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:A0A078GBE8	UniProt:A0A078GBE8
InterPro:ACT_dom	EnsemblPlants:CDY22691	ProteinID:CDY22691	ProteinID:CDY22691.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSBRNA2T00019363001
InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniPathway:UPA00121	UniParc:UPI0004EBB855	SEG:seg	:

Description

BnaC08g43250DArogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A078GBE8]

Coordinates

chrLK032134:+:492133..493453

Molecular Weight (calculated)

45659.0 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.266

Length

418 amino acids

Sequence
(BLAST)

001: MKAAAQLARS YPSEQNAQGT DTYETSRTEW QSSSAILTSK VVSQEQSETL PMPPVSVGVD HVNGHNSTAR VPHHQKPLTV NDLSPTPMHG SNLRVAYQGV
101: PGAYSEAAAA KAYHNCEAIP CDQFEVAFQA VELWTADRAV LPVENSLGGS IHRNYDLLLR HRLHIVGEVH LPVHHCLLAL PGVRKELLTR VISHPQGLAQ
201: CERTLTKLGL NVSRKAVEDT AGAAEFIAAN NLRDTAAIAS ARAAEIYGLE ILEDGIQDDA SNVTRFVMLA REPIVPRTDR PFKTSIVFAH EKGTSVLFKV
301: LSALAFRDIS LTKIESRPNH NRPIRLVDDA NVGTAKHFEY MFYIDFEASM AETRAQNALS EVQEFTSFLR VLGSYPMDMT PWSPSSSTSH TASSYTDLSL
401: SQTIPPRPTG IGKEGPGG

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.