Factsheet for GSMUA_Achr3P22810_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P22810_001
GSMUA_Achr4P04340_001
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr5P14740_001
GSMUA_Achr7P01890_001
GSMUA_Achr8P07590_001
GSMUA_Achr8P33080_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	GSMUA_Achr10P...	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr3P22810_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr8P07590_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr8P33080_001	AT3G44720.1	21798944
AT3G44720.1	GSMUA_AchrUn_...	AT3G44720.1	21798944
AT3G44720.1	GSMUA_Achr4P04340_001	AT3G54826.1	21798944
AT3G44720.1	GSMUA_Achr4P20870_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr4P22090_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr5P14740_001	AT5G65683.1	21798944
AT3G44720.1	GSMUA_Achr7P01890_001	AT5G65683.1	21798944
AT5G22630.1	GSMUA_Achr10P...	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr3P22810_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr8P07590_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr8P33080_001	AT3G44720.1	21798944
AT5G22630.1	GSMUA_AchrUn_...	AT3G44720.1	21798944
AT5G22630.1	GSMUA_Achr10P...	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr3P22810_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr8P07590_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_Achr8P33080_001	AT5G22630.1	21798944
AT5G22630.1	GSMUA_AchrUn_...	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07590_001	Banana	cytosol	58.57	80.35
GSMUA_AchrUn_...	Banana	plastid	67.52	66.33
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	67.77	64.48
KRH26581	Soybean	plastid	67.26	61.88
KRH22725	Soybean	plastid	66.75	61.56
CDY06307	Canola	cytosol	61.38	60.91
KRH25168	Soybean	plastid	66.5	60.75
Bra031620.1-P	Field mustard	cytosol	61.13	60.66
AT1G08250.1	Thale cress	plastid	63.94	60.53
CDY30526	Canola	plastid	64.45	60.29
Bra034372.1-P	Field mustard	plastid	64.45	60.29
Solyc11g066890.1.1	Tomato	plastid	65.22	59.72
PGSC0003DMT400018339	Potato	plastid	65.98	59.58
Solyc06g074530.1.1	Tomato	plastid	65.98	59.58
GSMUA_Achr8P33080_001	Banana	plastid	66.24	59.4
CDX77139	Canola	plastid	64.45	59.15
KRH30513	Soybean	plastid	64.71	59.11
PGSC0003DMT400068261	Potato	plastid	65.22	58.89
AT2G27820.1	Thale cress	plastid	63.68	58.73
CDY22691	Canola	cytosol	62.66	58.61
AT5G22630.1	Thale cress	plastid	62.4	57.41
CDY26946	Canola	plastid	62.4	57.41
CDX92343	Canola	plastid	62.15	57.18
CDY72678	Canola	plastid	60.87	56.8
Bra031619.1-P	Field mustard	plastid	60.87	56.8
Bra002423.1-P	Field mustard	plastid	62.66	56.71
CDY09152	Canola	plastid	61.64	56.71
CDY59281	Canola	plastid	61.38	56.47
CDY22692	Canola	plastid	60.36	56.32
Bra020203.1-P	Field mustard	plastid	61.89	56.02
CDY30932	Canola	plastid	55.24	55.96
Bra019468.1-P	Field mustard	plastid	55.24	55.96
AT3G44720.1	Thale cress	plastid	60.36	55.66
CDX77841	Canola	plastid	54.73	55.3
GSMUA_Achr10P...	Banana	plastid	28.9	54.33
GSMUA_Achr8P15920_001	Banana	cytosol	43.22	52.0
GSMUA_Achr10P...	Banana	cytosol	43.73	49.14
GSMUA_Achr6P15520_001	Banana	cytosol	41.43	47.65
GSMUA_Achr6P17230_001	Banana	plastid	33.25	44.52
GSMUA_Achr4P23700_001	Banana	plastid	46.04	43.9
GSMUA_Achr7P00270_001	Banana	cytosol	27.11	40.61
GSMUA_Achr1P03870_001	Banana	plastid	32.23	35.9
GSMUA_Achr3P18150_001	Banana	plastid	29.92	32.41
GSMUA_Achr8P18790_001	Banana	plastid	32.23	30.81
GSMUA_Achr3P24700_001	Banana	plastid	29.67	30.77
GSMUA_Achr5P18480_001	Banana	plastid	30.43	29.31

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr3G22810_001	EnsemblPlants:GSMUA_Achr3P22810_001	EnsemblPlants:GSMUA_Achr3T22810_001	InterPro:IPR001086	UniProt:M0SGZ7	PFAM:PF00800
ScanProsite:PS00858	PFscan:PS51171	PANTHER:PTHR21022	PANTHER:PTHR21022:SF13	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000294DC1F	SEG:seg	:	:

Description

Arogenate dehydratase/prephenate dehydratase 6, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G22810_001]

Coordinates

chr3:-:23656972..23658315

Molecular Weight (calculated)

41798.5 Da

IEP (calculated)

7.645

GRAVY (calculated)

-0.170

Length

391 amino acids

Sequence
(BLAST)

001: MAAALLSSPP KVIPTTAPPV AAAGSALLLR SRHALAPVRS ILRPDSSAPF NRADWQASCA ILSSKAAAAT GSSSDKPPSP SGDPPAADTE PDNDGGGNNH
101: RPPSAIYGAR TSLDPVSNLP RPLTISDLSP TPMHGSRLRV AYQGVPGAYS EAAAGKAYPN CEAIPCDQFE VAFQAVELWI ADRAVLPIEN SLGGSIHRNY
201: DLLLRHRLHI VGEVQLPVHH CLLALPGVRK EYLTRVMSHP QALAHKGLRD TAAIASARAA ELYGLQVLAD GIQDDGCNVT RFGTSVLFKV LSAFAFRNIC
301: LTKIESRPHR HRPIRLVDDA NVGTAKHFEY MFYIDFQASM AETRAQNALA EIQEFTSFLR LLGSYPTDMT PWGPTSSSNS PPSPSSSSSL D

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.