Factsheet for Bra019468.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003197.1-P
Bra007101.1-P
Bra010996.1-P
Bra012474.1-P
Bra019468.1-P
Bra024408.1-P
Bra024741.1-P
Bra031849.1-P
Bra035030.1-P
Bra039992.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	Bra010996.1-P	AT1G25490.1	21798944
AT3G44720.1	Bra012474.1-P	AT1G25490.1	21798944
AT3G44720.1	Bra024741.1-P	AT1G25490.1	21798944
AT3G44720.1	Bra035030.1-P	AT1G25490.1	21798944
AT3G44720.1	Bra039992.1-P	AT1G25490.1	21798944
AT3G44720.1	Bra019468.1-P	AT3G44720.1	21798944
AT3G44720.1	Bra003197.1-P	AT3G54826.1	21798944
AT3G44720.1	Bra007101.1-P	AT3G54826.1	21798944
AT3G44720.1	Bra024408.1-P	AT5G65683.1	21798944
AT3G44720.1	Bra031849.1-P	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30932	Canola	plastid	98.19	98.19
CDX77841	Canola	plastid	95.85	95.61
AT3G44720.1	Thale cress	plastid	88.34	80.42
Bra002423.1-P	Field mustard	plastid	83.94	75.0
Bra020203.1-P	Field mustard	plastid	81.61	72.92
GSMUA_Achr8P07590_001	Banana	cytosol	48.7	65.96
KRH26581	Soybean	plastid	70.98	64.47
KRH22725	Soybean	plastid	70.47	64.15
PGSC0003DMT400018339	Potato	plastid	70.47	62.82
Solyc06g074530.1.1	Tomato	plastid	70.47	62.82
Solyc11g066890.1.1	Tomato	plastid	69.43	62.76
Bra031620.1-P	Field mustard	cytosol	63.21	61.93
PGSC0003DMT400068261	Potato	plastid	69.17	61.66
Bra034372.1-P	Field mustard	plastid	66.58	61.48
KRH30513	Soybean	plastid	67.36	60.75
KRH25168	Soybean	plastid	67.1	60.51
Os09t0565700-01	Rice	plastid	62.69	60.35
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	55.18	60.17
Os09t0566050-00	Rice	plastid	63.21	59.95
Zm00001d025333_P001	Maize	plastid	64.77	59.67
Zm00001d003830_P001	Maize	plastid	65.03	58.92
TraesCS2D01G290000.1	Wheat	plastid	62.69	58.45
TraesCS2B01G308500.1	Wheat	plastid	62.44	58.21
EES10725	Sorghum	plastid	65.03	58.1
TraesCS2A01G292000.1	Wheat	plastid	62.18	57.97
Zm00001d005351_P001	Maize	plastid	62.95	57.58
TraesCS5B01G372500.1	Wheat	plastid	62.44	57.38
Os04t0406600-01	Rice	plastid	64.77	57.34
TraesCS5D01G379700.1	Wheat	plastid	62.69	57.21
GSMUA_AchrUn_...	Banana	plastid	58.81	57.04
TraesCS5A01G370200.1	Wheat	plastid	62.18	56.87
TraesCS2B01G308400.1	Wheat	plastid	61.4	56.56
HORVU5Hr1G092190.1	Barley	plastid	62.18	56.34
TraesCS2D01G289900.2	Wheat	plastid	60.62	56.25
Bra031619.1-P	Field mustard	plastid	60.36	55.61
EER96348	Sorghum	plastid	62.69	55.25
GSMUA_Achr3P22810_001	Banana	plastid	55.96	55.24
GSMUA_Achr8P33080_001	Banana	plastid	61.14	54.13
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.62	50.87
TraesCS2A01G291900.1	Wheat	plastid	60.62	50.32
GSMUA_Achr10P...	Banana	plastid	26.17	48.56
Bra029665.1-P	Field mustard	plastid	45.34	46.17
Bra001262.1-P	Field mustard	plastid	44.82	45.65
Bra016813.1-P	Field mustard	mitochondrion	43.78	44.13

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	EnsemblPlantsGene:Bra019468
EnsemblPlants:Bra019468.1	EnsemblPlants:Bra019468.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009987	GO:GO:0047769
GO:GO:0080167	InterPro:IPR001086	InterPro:IPR002912	UniProt:M4DSH5	PFAM:PF00800	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000253F14E	SEG:seg	:	:

Description

AT3G44720 (E=1e-119) ADT4 | ADT4 (arogenate dehydratase 4); arogenate dehydratase/ prephenate dehydratase

Coordinates

chrA06:+:13256444..13258786

Molecular Weight (calculated)

41894.6 Da

IEP (calculated)

7.169

GRAVY (calculated)

-0.138

Length

386 amino acids

Sequence
(BLAST)

001: MQAATSCDLK FRSTNLTAST ARPTNGMSKR VNVLCGYRSM PFSFRNGVSV SRADWQSSSA ILSSKVASVE DPGGLADKIA VVNGHKNGSV DLSLVPVETT
101: NGKLSQVQPL TITDLSPAPL HGSNLRVAYQ GVPGAYSEAA AGKAYPNCEA IPCDQFDVAF QAVELWIADR AVLPVENSLG GSIHRNYDLL LRHRLHIVGE
201: VQIPVHHCLL ALPGVRTDCV SRVISHPQAL AQTERSLDNL TPRAAREAFH DTAAAAEYIA ANNLHDTAAV ASDRPFKTSI VFAAQEHKGT SVLFKVLSAF
301: AFRNISLTKI ESRPHHNRPL RVVGDGSFGT AKNFEYMFYV DFEASMAETR AQNALSEVQE YTSFLRVLGS YPMDMTPWSM SPTEDA

Best Arabidopsis Sequence Match ( AT3G44720.1 )
(BLAST)

001: MQAATSCDLK FRSTDPTSRN KCFSHAIPKR VAVTCGYRSE SFSFPNGVSV SRSDWQSSCA ILSSKVASVE NTGGLADKIA AVNGHTNGSV NLGLVAVEST
101: NGKLAPAQPL TITDLSPAPL HGSSLRVAYQ GVPGAYSEAA AGKAYPNCDA IPCDQFDVAF QAVELWIADR AVLPVENSLG GSIHRNYDLL LRHRLHIVGE
201: VQIPVHHCLL ALPGVRTDCV SRVISHPQAL AQTEHSLDVL TPHAAREAFH DTAAAAEYIS ANDLHDTAAV ASARAAELYN LQILADGIQD DPGNVTRFLM
301: LAREPIIPRT DRPFKTSIVF AAQEHKGTSV LFKVLSAFAF RDISLTKIES RPHHNRPLRV VGDGSFGTSK NFEYMFYVDF EASMAEPRAQ NALAEVQEYT
401: SFLRVLGSYP MDMTPWSMTS TEEA

Arabidopsis Description

ADT4Arogenate dehydratase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22241]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.