Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G045100.1
TraesCS2A01G291900.1
TraesCS2A01G292000.1
TraesCS2B01G057300.1
TraesCS2B01G308400.1
TraesCS2B01G308500.1
TraesCS2D01G043700.1
TraesCS2D01G289900.2
TraesCS2D01G290000.1
TraesCS5A01G370200.1
TraesCS5B01G372500.1
TraesCS5D01G379700.1
TraesCS6A01G395100.1
TraesCS6B01G435000.1
TraesCS6D01G380400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G44720.1 TraesCS2A01G291900.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2A01G292000.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2B01G308400.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2B01G308500.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS2D01G289900.2 AT3G44720.1 21798944
AT3G44720.1 TraesCS2D01G290000.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5A01G370200.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5B01G372500.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS5D01G379700.1 AT3G44720.1 21798944
AT3G44720.1 TraesCS6A01G395100.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS6B01G435000.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS6D01G380400.1 AT3G54826.1 21798944
AT3G44720.1 TraesCS2A01G045100.1 AT5G65683.1 21798944
AT3G44720.1 TraesCS2B01G057300.1 AT5G65683.1 21798944
AT3G44720.1 TraesCS2D01G043700.1 AT5G65683.1 21798944
AT5G22630.1 TraesCS2A01G291900.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2A01G292000.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2B01G308400.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2B01G308500.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2D01G289900.2 AT3G44720.1 21798944
AT5G22630.1 TraesCS2D01G290000.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5A01G370200.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5B01G372500.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS5D01G379700.1 AT3G44720.1 21798944
AT5G22630.1 TraesCS2A01G291900.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2A01G292000.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2B01G308400.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2B01G308500.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS2D01G289900.2 AT5G22630.1 21798944
AT5G22630.1 TraesCS2D01G290000.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5A01G370200.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5B01G372500.1 AT5G22630.1 21798944
AT5G22630.1 TraesCS5D01G379700.1 AT5G22630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G370200.1 Wheat plastid 97.62 97.16
TraesCS5D01G379700.1 Wheat plastid 97.14 96.45
HORVU5Hr1G092190.1 Barley plastid 95.95 94.6
Zm00001d005351_P001 Maize plastid 80.71 80.33
Os09t0565700-01 Rice plastid 75.24 78.8
EER96348 Sorghum plastid 81.9 78.54
Os09t0566050-00 Rice plastid 75.71 78.13
TraesCS2B01G308500.1 Wheat plastid 72.38 73.43
VIT_06s0061g01300.t01 Wine grape mitochondrion, plastid 71.19 72.75
TraesCS2B01G308400.1 Wheat plastid 71.19 71.36
CDY06307 Canola cytosol 66.43 70.81
Solyc11g066890.1.1 Tomato plastid 71.67 70.49
AT1G08250.1 Thale cress plastid 69.29 70.46
KRH22725 Soybean plastid 70.95 70.28
KRH26581 Soybean plastid 70.95 70.12
CDY30526 Canola plastid 69.76 70.1
Bra034372.1-P Field mustard plastid 69.76 70.1
Bra031620.1-P Field mustard cytosol 65.71 70.05
AT2G27820.1 Thale cress plastid 70.48 69.81
Solyc06g074530.1.1 Tomato plastid 71.9 69.75
PGSC0003DMT400018339 Potato plastid 71.9 69.75
CDX77139 Canola plastid 70.0 69.01
PGSC0003DMT400068261 Potato plastid 70.95 68.82
KRH25168 Soybean plastid 69.05 67.76
KRH30513 Soybean plastid 69.05 67.76
CDY22691 Canola cytosol 67.38 67.7
Bra031619.1-P Field mustard plastid 65.24 65.39
CDY72678 Canola plastid 65.24 65.39
AT3G44720.1 Thale cress plastid 65.95 65.33
CDY22692 Canola plastid 64.76 64.92
CDX92343 Canola plastid 65.24 64.47
CDY09152 Canola plastid 65.24 64.47
AT5G22630.1 Thale cress plastid 65.24 64.47
CDY59281 Canola plastid 65.0 64.24
CDY26946 Canola plastid 64.76 64.0
Bra002423.1-P Field mustard plastid 65.48 63.66
Bra020203.1-P Field mustard plastid 65.24 63.43
Bra019468.1-P Field mustard plastid 57.38 62.44
CDX77841 Canola plastid 56.9 61.76
CDY30932 Canola plastid 56.67 61.66
TraesCS2B01G096300.1 Wheat plastid 50.24 55.53
TraesCS4B01G197700.1 Wheat plastid 45.0 47.49
TraesCS1B01G195800.2 Wheat plastid 36.67 38.02
Protein Annotations
KEGG:00400+4.2.1.51Gene3D:3.30.70.260Gene3D:3.40.190.10MapMan:4.1.5.2.4InterPro:ACT_domGO:GO:0003674
GO:GO:0003824GO:GO:0004664GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009094
GO:GO:0009987InterPro:IPR001086InterPro:IPR002912PFAM:PF00800ScanProsite:PS00857ScanProsite:PS00858
PFscan:PS51171PFscan:PS51671PANTHER:PTHR21022PANTHER:PTHR21022:SF13InterPro:Preph_deHydtaseInterPro:Preph_deHydtase_CS
SUPFAM:SSF53850SUPFAM:SSF55021EnsemblPlantsGene:TraesCS5B01G372500EnsemblPlants:TraesCS5B01G372500.1TIGR:cd04905TIGR:cd13631
SEG:seg:::::
Description
No Description!
Coordinates
chr5B:+:550488630..550489892
Molecular Weight (calculated)
45003.6 Da
IEP (calculated)
7.035
GRAVY (calculated)
-0.064
Length
420 amino acids
Sequence
(BLAST)
001: MEAAAAIRSA AAPRMRLAGR SSRGSGAAAA RAIPVSRSDW QTACAILSST NDSPTPPAPK VNGQNNINKL AAPAIPGSED AVSGLDLVLA AGAGNLPRPL
101: SISDLSPAPL HGAQLRVAYQ GVPGAYSEAA AGKAYPGCEA IPCDQFEVAF QAVELWIADR AVLPVENSLG GSIHRNYDLL LRHRLHIVGE VQLPVHHCLL
201: ALPGVRRELL ARVISHPQAL AQCEHTLTRM GLNVAREAFD DTAGAAEHIA AHALRDTAAI ASARAAELYG LQVLADGVQD DAGNVTRFVM LAREPIIPRT
301: DRPFKTSIVL AHDREGTSVL FKVLSAFAFR DISLTKIESR PHRHRPIRLV DDANIGTAKH FEYMFYIDFQ ASMADVRAQN ALAEIQEFTS FLRVLGSYPM
401: DMTPWDAAPS SSSSDQQQRG
Best Arabidopsis Sequence Match ( AT3G44720.1 )
(BLAST)
001: MQAATSCDLK FRSTDPTSRN KCFSHAIPKR VAVTCGYRSE SFSFPNGVSV SRSDWQSSCA ILSSKVASVE NTGGLADKIA AVNGHTNGSV NLGLVAVEST
101: NGKLAPAQPL TITDLSPAPL HGSSLRVAYQ GVPGAYSEAA AGKAYPNCDA IPCDQFDVAF QAVELWIADR AVLPVENSLG GSIHRNYDLL LRHRLHIVGE
201: VQIPVHHCLL ALPGVRTDCV SRVISHPQAL AQTEHSLDVL TPHAAREAFH DTAAAAEYIS ANDLHDTAAV ASARAAELYN LQILADGIQD DPGNVTRFLM
301: LAREPIIPRT DRPFKTSIVF AAQEHKGTSV LFKVLSAFAF RDISLTKIES RPHHNRPLRV VGDGSFGTSK NFEYMFYVDF EASMAEPRAQ NALAEVQEYT
401: SFLRVLGSYP MDMTPWSMTS TEEA
Arabidopsis Description
ADT4Arogenate dehydratase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22241]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.