Factsheet for Os09t0565700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0819700-01
Os04t0101800-01
Os04t0406600-01
Os09t0565700-01
Os09t0566050-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	Os04t0406600-01	AT3G44720.1	21798944
AT3G44720.1	Os09t0565700-01	AT3G44720.1	21798944
AT3G44720.1	Os09t0566050-00	AT3G44720.1	21798944
AT3G44720.1	Os02t0819700-01	AT3G54826.1	21798944
AT3G44720.1	Os04t0101800-01	AT5G65683.1	21798944
AT5G22630.1	Os04t0406600-01	AT3G44720.1	21798944
AT5G22630.1	Os09t0565700-01	AT3G44720.1	21798944
AT5G22630.1	Os09t0566050-00	AT3G44720.1	21798944
AT5G22630.1	Os04t0406600-01	AT5G22630.1	21798944
AT5G22630.1	Os09t0565700-01	AT5G22630.1	21798944
AT5G22630.1	Os09t0566050-00	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0566050-00	Rice	plastid	94.26	92.87
Zm00001d005351_P001	Maize	plastid	83.04	78.91
EER96348	Sorghum	plastid	84.29	77.17
TraesCS5B01G372500.1	Wheat	plastid	78.8	75.24
TraesCS5A01G370200.1	Wheat	plastid	79.05	75.12
HORVU5Hr1G092190.1	Barley	plastid	79.05	74.41
TraesCS5D01G379700.1	Wheat	plastid	78.3	74.23
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	74.31	72.51
Os04t0406600-01	Rice	plastid	77.06	70.87
KRH26581	Soybean	plastid	74.31	70.12
CDY06307	Canola	cytosol	68.83	70.05
CDY30526	Canola	plastid	72.82	69.86
Bra034372.1-P	Field mustard	plastid	72.57	69.62
KRH22725	Soybean	plastid	73.32	69.34
Bra031620.1-P	Field mustard	cytosol	68.08	69.29
Solyc11g066890.1.1	Tomato	plastid	73.32	68.85
Solyc06g074530.1.1	Tomato	plastid	74.06	68.59
CDX77139	Canola	plastid	72.82	68.54
AT1G08250.1	Thale cress	plastid	70.57	68.52
PGSC0003DMT400018339	Potato	plastid	73.82	68.36
AT2G27820.1	Thale cress	plastid	71.82	67.92
PGSC0003DMT400068261	Potato	plastid	73.07	67.67
KRH25168	Soybean	plastid	71.82	67.29
CDY22691	Canola	cytosol	70.07	67.22
KRH30513	Soybean	plastid	71.32	66.82
AT5G22630.1	Thale cress	plastid	69.58	65.65
CDX92343	Canola	plastid	69.08	65.18
CDY09152	Canola	plastid	69.08	65.18
CDY59281	Canola	plastid	68.58	64.71
CDY26946	Canola	plastid	68.58	64.71
AT3G44720.1	Thale cress	plastid	68.08	64.39
CDY72678	Canola	plastid	67.08	64.2
Bra020203.1-P	Field mustard	plastid	69.08	64.12
Bra002423.1-P	Field mustard	plastid	69.08	64.12
Bra031619.1-P	Field mustard	plastid	66.83	63.96
CDY22692	Canola	plastid	66.58	63.72
Bra019468.1-P	Field mustard	plastid	60.35	62.69
CDY30932	Canola	plastid	59.6	61.92
CDX77841	Canola	plastid	59.6	61.76
Os07t0694600-01	Rice	plastid	50.12	55.22
Os03t0286200-01	Rice	plastid	52.12	52.38
Os10t0523700-01	Rice	plastid	37.41	36.76
Os07t0512000-01	Rice	mitochondrion	25.94	33.55

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	EntrezGene:4347875	InterPro:ACT_dom
EMBL:AK066427	ProteinID:BAD46234.1	ProteinID:BAD46656.1	ProteinID:BAF25864.1	ProteinID:BAT09454.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004106	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073
GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829
GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	EnsemblPlantsGene:Os09g0565700	EnsemblPlants:Os09t0565700-01	PFAM:PF00800
ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14
InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	UniProt:Q650W1	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000043A51D
RefSeq:XP_015651193.1	RefSeq:XP_015651195.1	SEG:seg	:	:	:

Description

Prephenate dehydratase domain containing protein. (Os09t0565700-01)

Coordinates

chr9:+:22542195..22543863

Molecular Weight (calculated)

43712.2 Da

IEP (calculated)

6.956

GRAVY (calculated)

-0.085

Length

401 amino acids

Sequence
(BLAST)

001: METSPALRPA HIPRSTAVRP PCATPFSRAH WHATCAAIRR VPRVNGDSNS SIKPALADHA APPLDLDLLP VSNLPRPLTI TDLSPAPMHG SQLRVAYQGV
101: PGAYSEAAAA KAYPSCDAIP CDQFEVAFQA VELWIADRAV LPVENSLGGS IHRNYDLLLR HRLHIVGEVQ LPVHHCLLAL PGVRRDLLTR VISHPQALAQ
201: CELTLNAMGL NVAREAFDDT AAAAEHVAAA GLRDTAAIAS SRAAELYGLQ VLADGIQDDA GNVTRFVMLA REPIIPRTDR PFKTSIVFAH DREGTSVLFK
301: VLSAFAFRDI SLTKIESRPH RHRPIRLVDD ANVGTAKHFE YMFYIDFQAS MAEVRAQNAL SEIQEFTSFL RVLGSYPMDM TPWEYSSSSS PSPAPGGDTS
401: R

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.