Factsheet for Os07t0694600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G080100.1	Wheat	plastid	86.26	82.2
TraesCS2B01G096300.1	Wheat	plastid	85.44	81.84
TraesCS2A01G082200.1	Wheat	plastid	86.81	81.44
Os03t0286200-01	Rice	plastid	76.65	69.92
HORVU2Hr1G013500.1	Barley	nucleus	74.45	66.75
GSMUA_Achr10P...	Banana	cytosol	63.46	66.38
GSMUA_Achr6P15520_001	Banana	cytosol	61.81	66.18
CDY28030	Canola	plastid	62.09	60.11
CDX74036	Canola	plastid	62.36	59.89
Bra029665.1-P	Field mustard	plastid	62.09	59.63
CDY35951	Canola	plastid	61.81	59.37
Bra001262.1-P	Field mustard	plastid	61.54	59.1
CDY07984	Canola	plastid	61.26	58.84
VIT_06s0004g03430.t01	Wine grape	plastid	62.64	58.76
KRH24944	Soybean	plastid	50.0	58.71
AT3G07630.3	Thale cress	plastid	61.26	58.53
KRG89060	Soybean	plastid	61.81	58.44
PGSC0003DMT400065276	Potato	plastid	62.64	57.58
Solyc11g072520.1.1	Tomato	plastid	59.89	55.47
Os09t0565700-01	Rice	plastid	55.22	50.12
Os09t0566050-00	Rice	plastid	54.95	49.14
Os04t0406600-01	Rice	plastid	54.67	45.64
Os10t0523700-01	Rice	plastid	37.64	33.58
Os07t0512000-01	Rice	mitochondrion	26.37	30.97

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	EntrezGene:4344396	InterPro:ACT_dom
EMBL:AK066428	ProteinID:BAC84062.1	ProteinID:BAF22654.1	ProteinID:BAT03376.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	InterPro:IPR001086
InterPro:IPR002912	EnsemblPlantsGene:Os07g0694600	EnsemblPlants:Os07t0694600-01	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
UniProt:Q6Z3Y3	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI00001BF55E	RefSeq:XP_015646555.1	SEG:seg

Description

prephenate dehydratase, arogenate dehydratase, 5MT resistant 1, 5-methyltryptophan resistant 1Prephenate dehydratase domain containing protein. (Os07t0694600-01)

Coordinates

chr7:-:29579838..29583146

Molecular Weight (calculated)

39895.0 Da

IEP (calculated)

8.284

GRAVY (calculated)

-0.185

Length

364 amino acids

Sequence
(BLAST)

001: MVSPSLRIPA AARVFDPAIN TRCPPPHAVV MRMRSRSRRS IAASASPPGD PSIRDPISLP RPLTSADLME ASGDGLKVAY QGCPGAYSEA AAKKAYPSCH
101: TVPCEYFETA FQAVENWVAD RAVLPLENSL GGSIHRNYDL LLRHRLHIVG EVRLAVRHCL LANRGVKIQN LRSAMSHPQA LAQCEQTLTK LGIEHREAVD
201: DTAGAAKLIA EQKLQDTGAV ASSLAAQLYG LDILAENIQD DTDNVTRFMM LAREPIIPRT DKPFKTSIVF SLEEGPGQLF KALAVFALRK INLTKMESRP
301: HKKKPLRIAD DNCSAPLKHF DYLFYVDLEA SMADPNAQNA LANLKEFATF LRVLGSYPTD VSEA

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.