CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74036	Canola	plastid	96.31	96.31
Bra001262.1-P	Field mustard	plastid	96.04	96.04
CDY35951	Canola	plastid	88.92	88.92
CDY28030	Canola	plastid	87.34	88.03
AT3G07630.3	Thale cress	plastid	85.49	85.04
GSMUA_Achr10P...	Banana	cytosol	64.12	69.83
GSMUA_Achr6P15520_001	Banana	cytosol	60.95	67.94
KRG89060	Soybean	plastid	68.87	67.79
VIT_06s0004g03430.t01	Wine grape	plastid	69.13	67.53
KRH24944	Soybean	plastid	54.62	66.77
PGSC0003DMT400065276	Potato	plastid	68.07	65.15
Solyc11g072520.1.1	Tomato	plastid	65.96	63.61
Os07t0694600-01	Rice	plastid	58.84	61.26
TraesCS2B01G096300.1	Wheat	plastid	61.21	61.05
TraesCS2D01G080100.1	Wheat	plastid	61.48	60.99
TraesCS2A01G082200.1	Wheat	plastid	61.21	59.79
EER95050	Sorghum	plastid	59.37	58.44
TraesCS4D01G198400.1	Wheat	plastid	60.42	57.39
TraesCS4A01G106500.1	Wheat	plastid	60.42	57.39
HORVU4Hr1G057140.3	Barley	plastid	59.63	56.64
Os03t0286200-01	Rice	plastid	59.37	56.39
Zm00001d047755_P006	Maize	plastid	55.41	53.57
TraesCS4B01G197700.1	Wheat	plastid	55.94	53.27
CDY31213	Canola	mitochondrion	53.56	53.14
TraesCS4D01G198200.1	Wheat	plastid	55.67	53.02
CDY21012	Canola	mitochondrion	53.56	53.0
TraesCS4A01G106600.1	Wheat	plastid	55.41	52.9
HORVU2Hr1G013500.1	Barley	nucleus	55.94	52.22
CDX88512	Canola	plastid	17.15	51.59
CDY06307	Canola	cytosol	51.98	50.0
CDY30526	Canola	plastid	54.09	49.04
Zm00001d028712_P007	Maize	plastid	55.15	48.83
HORVU4Hr1G057130.1	Barley	cytosol	12.14	48.42
CDX77139	Canola	plastid	54.09	48.12
CDY22691	Canola	cytosol	51.98	47.13
CDX92343	Canola	plastid	51.19	45.65
CDY26946	Canola	plastid	51.19	45.65
CDY72678	Canola	plastid	50.4	45.58
CDY09152	Canola	plastid	50.92	45.41
CDY59281	Canola	plastid	50.92	45.41
CDY22692	Canola	plastid	50.13	45.35
CDX98196	Canola	extracellular	10.82	43.62
CDX77841	Canola	plastid	44.33	43.41
CDY30932	Canola	plastid	44.06	43.26
CDX75178	Canola	cytosol	7.65	42.03
CDY19368	Canola	cytosol	52.24	27.35

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:A0A078F4L7	UniProt:A0A078F4L7
InterPro:ACT_dom	EnsemblPlants:CDY07984	ProteinID:CDY07984	ProteinID:CDY07984.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:GSBRNA2T00125206001
InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	UniPathway:UPA00121	UniParc:UPI0004EE454B	SEG:seg	:

Description

BnaC03g35390DArogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A078F4L7]

Coordinates

chrLK031982:-:423290..425775

Molecular Weight (calculated)

41693.0 Da

IEP (calculated)

7.395

GRAVY (calculated)

-0.107

Length

379 amino acids

Sequence
(BLAST)

001: MAVHTVRSLA THLHTGTSRN ISPSHRNPNA AIRLSYRSPK LRRFISVSSS LREGNEHGKE NSVRALEVKN IPEESPLLPK ALSSNQLAEP VSNGSRVRVA
101: YQGVRGAYSE SAAEKAYPNC EAVPCEEFDT AFEAVERWLV DRAVLPIENS LGGSIHRNYD LLLRHNLHIV GEVKLAVRHC LLANHGVNLV DLRRVLSHPQ
201: ALAQCENTLT RLGLVREAVD DTAGAAKLIA LEGLSDAAAV ASAKAAEIYG LSVVAEDIQD ESDNVTRFLM LAREPIIPGT NKLFKTSIVF SLEEGPGVLF
301: KALAVFALRQ INLTKMESRP LRKTPLRASG GLKYFDYLFY VDFEASMADE VAQNALRHLE EFATFLRVLG SYPVDTTML

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.