Factsheet for TraesCS4D01G198400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G106500.1	Wheat	plastid	99.25	99.25
HORVU4Hr1G057140.3	Barley	plastid	96.74	96.74
TraesCS4D01G198200.1	Wheat	plastid	83.21	83.42
EER95050	Sorghum	plastid	75.94	78.7
Os03t0286200-01	Rice	plastid	78.45	78.45
TraesCS2D01G080100.1	Wheat	plastid	70.43	73.56
Zm00001d047755_P006	Maize	plastid	71.18	72.45
Zm00001d028712_P007	Maize	plastid	72.18	67.29
GSMUA_Achr10P...	Banana	cytosol	58.15	66.67
GSMUA_Achr6P15520_001	Banana	cytosol	56.39	66.18
CDY28030	Canola	plastid	58.15	61.7
CDX74036	Canola	plastid	58.15	61.21
Bra029665.1-P	Field mustard	plastid	57.89	60.95
CDY35951	Canola	plastid	57.64	60.69
Bra001262.1-P	Field mustard	plastid	57.64	60.69
CDY07984	Canola	plastid	57.39	60.42
KRG89060	Soybean	plastid	58.15	60.26
AT3G07630.3	Thale cress	plastid	57.39	60.1
KRH24944	Soybean	plastid	46.62	60.0
VIT_06s0004g03430.t01	Wine grape	plastid	57.64	59.28
PGSC0003DMT400065276	Potato	plastid	57.89	58.33
Solyc11g072520.1.1	Tomato	plastid	55.39	56.23
TraesCS2D01G290000.1	Wheat	plastid	50.63	48.79
TraesCS2D01G289900.2	Wheat	plastid	49.87	47.84
TraesCS5D01G379700.1	Wheat	plastid	50.13	47.28
TraesCS1D01G188500.1	Wheat	plastid	35.84	35.14

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:TraesCS4D01G198400	EnsemblPlants:TraesCS4D01G198400.1	TIGR:cd04905	TIGR:cd13631
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:344367239..344370923

Molecular Weight (calculated)

43509.0 Da

IEP (calculated)

7.619

GRAVY (calculated)

-0.196

Length

399 amino acids

Sequence
(BLAST)

001: MASMTTPRLP FLPARTRSAV AATSSSSPSS PLPRRSIKCS SSTNANSAPL PSTSRQPRAP VADGVGSADL NGLRAPPIPV ADSPLPAYRD PHGLPRPLTS
101: ADLMESSGEG LKVAYQGFPG AYSEAAAKKA YPNCQTVPCE HFDTAFQAVQ NWIVDRAVLP LENTLGGSIH RNYDLLLRHE LHIVGEVRLA VRHCLLANRG
201: VKIGNLRNVI SHPQALAQCE HTLTELGIEH RQAVDDTAGA AKLVAEQMLQ DTGAVASSLA AELYGLDILA ENIQDEKVNV TRFMMLAREP IIPRVDKPFK
301: TSIVFSLEEG PGQLFKALAV FALREINLTK IESRPHKKRP FRVADDAFST RVKYFDYLFY VDLEASMADP KTQNALRNLE EFATFLRVLG SYPTDVSEA

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.