Factsheet for PGSC0003DMT400065276

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g072520.1.1	Tomato	plastid	93.69	94.4
GSMUA_Achr10P...	Banana	cytosol	62.63	71.26
VIT_06s0004g03430.t01	Wine grape	plastid	69.7	71.13
AT3G07630.3	Thale cress	plastid	67.17	69.82
GSMUA_Achr6P15520_001	Banana	cytosol	59.85	69.71
CDY28030	Canola	plastid	66.16	69.68
Bra029665.1-P	Field mustard	plastid	66.67	69.66
CDY35951	Canola	plastid	66.67	69.66
KRG89060	Soybean	plastid	66.92	68.83
KRH24944	Soybean	plastid	53.54	68.39
Bra001262.1-P	Field mustard	plastid	65.15	68.07
CDY07984	Canola	plastid	65.15	68.07
CDX74036	Canola	plastid	64.9	67.81
Os07t0694600-01	Rice	plastid	57.58	62.64
TraesCS2B01G096300.1	Wheat	plastid	59.09	61.58
EER95050	Sorghum	plastid	59.85	61.56
TraesCS2D01G080100.1	Wheat	plastid	59.09	61.26
TraesCS2A01G082200.1	Wheat	plastid	58.84	60.05
Os03t0286200-01	Rice	plastid	60.1	59.65
TraesCS4A01G106500.1	Wheat	plastid	58.33	57.89
TraesCS4D01G198400.1	Wheat	plastid	58.33	57.89
HORVU4Hr1G057140.3	Barley	plastid	58.08	57.64
Zm00001d047755_P006	Maize	plastid	55.3	55.87
TraesCS4B01G197700.1	Wheat	plastid	54.29	54.02
TraesCS4D01G198200.1	Wheat	plastid	54.29	54.02
TraesCS4A01G106600.1	Wheat	plastid	54.04	53.9
PGSC0003DMT400042492	Potato	plastid	53.79	53.25
HORVU4Hr1G057130.1	Barley	cytosol	12.63	52.63
HORVU2Hr1G013500.1	Barley	nucleus	53.54	52.22
Zm00001d028712_P007	Maize	plastid	55.3	51.17
PGSC0003DMT400068261	Potato	plastid	55.81	51.04
PGSC0003DMT400018339	Potato	plastid	55.81	51.04

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:102602486	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073
GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829
GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	UniProt:M1CDP7	PFAM:PF00800	EnsemblPlantsGene:PGSC0003DMG400025374
PGSC:PGSC0003DMG400025374	EnsemblPlants:PGSC0003DMT400065276	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671
PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021
UniParc:UPI000294B273	RefSeq:XP_006366397.1	SEG:seg	:	:	:

Description

Arogenate dehydratase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400025374]

Coordinates

chr11:+:44340536..44349084

Molecular Weight (calculated)

43513.0 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.175

Length

396 amino acids

Sequence
(BLAST)

001: MAATIVRSPK LSLSLPTPES TTSNLPSLNQ SFFTPLPKRR RCISIYACTA GDQSNSAFGG EIKKGQAIEL NKVNDENPYE FNAKDSPNPL PRPLTSADLS
101: NMASEGSRLR VAYQGVRGAY SESAAEKAYP NCEAVPCEQF DTAFDAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRYRLH IVGEVKLAIR HCLLANNGVK
201: IEDLKRVLSH PQALAQCENT LTKLGLVREA VDDTAGAAKY IAFSKLKDAG AVASLAASRI YGLNVLAQDI QDDSDNVTRF LMLAREPIIP RTDKPFKTSV
301: VFSLDEGPGV LFKALAVFAM RSINLTKIES RPLQKQALRV LEDSVDGFPK YFPYLFYVDF EASMADQRAQ NALGHLKEFA TFLRVLGSYP SDSGIA

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.