Factsheet for Zm00001d028712_P007

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047755_P006	Maize	plastid	73.13	79.85
Os03t0286200-01	Rice	plastid	68.69	73.68
TraesCS4D01G198400.1	Wheat	plastid	67.29	72.18
TraesCS4A01G106500.1	Wheat	plastid	67.29	72.18
HORVU4Hr1G057140.3	Barley	plastid	66.59	71.43
TraesCS4A01G106600.1	Wheat	plastid	60.05	64.74
TraesCS4B01G197700.1	Wheat	plastid	59.58	64.07
TraesCS4D01G198200.1	Wheat	plastid	59.35	63.82
HORVU4Hr1G057130.1	Barley	cytosol	14.02	63.16
GSMUA_Achr10P...	Banana	cytosol	50.93	62.64
GSMUA_Achr6P15520_001	Banana	cytosol	48.83	61.47
CDY28030	Canola	plastid	50.23	57.18
KRG89060	Soybean	plastid	51.4	57.14
CDY35951	Canola	plastid	50.47	56.99
Bra029665.1-P	Field mustard	plastid	50.47	56.99
KRH24944	Soybean	plastid	40.65	56.13
AT3G07630.3	Thale cress	plastid	49.77	55.91
CDX74036	Canola	plastid	49.3	55.67
VIT_06s0004g03430.t01	Wine grape	plastid	50.47	55.67
Bra001262.1-P	Field mustard	plastid	49.07	55.41
PGSC0003DMT400065276	Potato	plastid	51.17	55.3
CDY07984	Canola	plastid	48.83	55.15
Solyc11g072520.1.1	Tomato	plastid	49.07	53.44
Zm00001d025333_P001	Maize	plastid	44.63	45.58
Zm00001d005351_P001	Maize	plastid	44.63	45.26
Zm00001d003830_P001	Maize	plastid	44.86	45.07
Zm00001d021611_P001	Maize	cytosol	31.31	44.37
Zm00001d048561_P001	Maize	plastid	30.37	33.51

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:100281744	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A1D6JYZ2
InterPro:ACT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016829	GO:GO:0047769	InterPro:IPR001086	InterPro:IPR002912	ProteinID:ONL96837.1	ProteinID:ONL96841.1
PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022
PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI000844CAA8
EnsemblPlantsGene:Zm00001d028712	EnsemblPlants:Zm00001d028712_P007	EnsemblPlants:Zm00001d028712_T007	SEG:seg	:	:

Description

Arogenate dehydratase/prephenate dehydratase 2 chloroplastic

Coordinates

chr1:+:43999111..44006651

Molecular Weight (calculated)

47205.7 Da

IEP (calculated)

9.024

GRAVY (calculated)

-0.245

Length

428 amino acids

Sequence
(BLAST)

001: MAPTACLRTP FFPARARSTN ATPFSPHRRF SLKCSASNGD NSNPNSISIS PTSPPRLTVS DGVESVDVNG LRRPPAPASV PAARDPHWLP RPLTSADVME
101: VDGKGLKVAY QVDNLREFGY GVKLRVVLER TAKQQQRRRT RIVRLCPVST STLHFRLQLA ARVAHSCVTE MPTAYGHAVQ NWVADRAVLP LENSLGGSIH
201: RNYDLLLRHS LHIVGEVRLA VRHCLLANPG VKIENLKSAM SHPQALAQCE HTLTSLGIEH REAVDDTAGA AKIVAEHMLQ DTGAIASSLA AKLYGLDVLA
301: ENIQDDKDNV TRFMMLAREP IIPRTDKPFK TSIVFSLEEG PGQLFKALAV FALRDINLTK IESRPHKERP LRVSDDCSSL LKNFDYLFYV DLEASMADPK
401: TQNALGNLKE FATFLRVLGS YPTDVNEP

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.