Factsheet for Zm00001d047755_P006

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95050	Sorghum	plastid	84.44	85.97
Zm00001d028712_P007	Maize	plastid	79.85	73.13
Os03t0286200-01	Rice	plastid	73.47	72.18
TraesCS4A01G106500.1	Wheat	plastid	72.7	71.43
TraesCS4D01G198400.1	Wheat	plastid	72.45	71.18
HORVU4Hr1G057140.3	Barley	plastid	71.94	70.68
TraesCS4A01G106600.1	Wheat	plastid	65.31	64.48
TraesCS4B01G197700.1	Wheat	plastid	65.05	64.07
TraesCS4D01G198200.1	Wheat	plastid	64.54	63.57
GSMUA_Achr10P...	Banana	cytosol	56.12	63.22
GSMUA_Achr6P15520_001	Banana	cytosol	53.57	61.76
HORVU4Hr1G057130.1	Barley	cytosol	14.8	61.05
KRG89060	Soybean	plastid	57.4	58.44
CDY28030	Canola	plastid	55.61	57.98
KRH24944	Soybean	plastid	45.66	57.74
CDY35951	Canola	plastid	55.61	57.52
Bra029665.1-P	Field mustard	plastid	55.36	57.26
AT3G07630.3	Thale cress	plastid	55.1	56.69
CDX74036	Canola	plastid	54.34	56.2
VIT_06s0004g03430.t01	Wine grape	plastid	55.61	56.19
Bra001262.1-P	Field mustard	plastid	54.08	55.94
CDY07984	Canola	plastid	53.57	55.41
PGSC0003DMT400065276	Potato	plastid	55.87	55.3
Solyc11g072520.1.1	Tomato	plastid	53.83	53.69
Zm00001d025333_P001	Maize	plastid	50.51	47.26
Zm00001d005351_P001	Maize	plastid	50.26	46.68
Zm00001d003830_P001	Maize	plastid	50.51	46.48
Zm00001d021611_P001	Maize	cytosol	34.95	45.36
Zm00001d048561_P001	Maize	plastid	34.18	34.54

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:100273905	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom
ProteinID:AQL07474.1	ProteinID:AQL07476.1	ProteinID:AQL07477.1	UniProt:B4FY26	EMBL:BT042014	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850
SUPFAM:SSF55021	UniParc:UPI00017B7564	EnsemblPlantsGene:Zm00001d047755	EnsemblPlants:Zm00001d047755_P006	EnsemblPlants:Zm00001d047755_T006	SEG:seg

Description

Arogenate dehydratase/prephenate dehydratase 2 chloroplastic

Coordinates

chr9:-:140918390..140926061

Molecular Weight (calculated)

42904.4 Da

IEP (calculated)

8.480

GRAVY (calculated)

-0.227

Length

392 amino acids

Sequence
(BLAST)

001: MAPTTCLRIP FLPARGRSAN VNAPPSWLPR RLSLKSSATN GDNSLPNPIS TSPTSPPWLT VVDVNGLRRP PAPVSAPTIP GDRGPRWLPR PFTSADVMGA
101: DWKGLKVAYQ GCAGAYSEAA AKKAYPNCEA VPCEHFDTAF QAVQNWVVDR AVLPLENSLG GSIHRNYDLL VQHSLHIVGE VRLEVHHCLL ANPGVKIENL
201: KSVMSHPQAL AQCEHTLTGL GIEHREAVDD TAGAAKIVAE HMVQDTGAIA SSLAAKLYGL DVLAENIQDG KNNVTRFMML ARKPNILRND RPFKTSIVFS
301: LEEGHGQLFR ALGVFAQRKI NLTKIESRPH KERPLRVSDD CSSLLKNFDY LFYVDLEASM ADPKIQNALG NLKEFATFLR VLGSYPTNVN EP

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.