Factsheet for Zm00001d021611_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15920_001	Banana	cytosol	48.68	45.23
Os07t0512000-01	Rice	mitochondrion	45.7	44.52
KRH22575	Soybean	cytosol	34.11	40.08
GSMUA_Achr4P23700_001	Banana	plastid	54.3	40.0
VIT_12s0059g00750.t01	Wine grape	plastid	50.33	38.48
GSMUA_Achr7P00270_001	Banana	cytosol	33.11	38.31
KRH26772	Soybean	plastid	48.01	37.76
AT1G11790.1	Thale cress	plastid	48.34	37.24
VIT_10s0116g01670.t01	Wine grape	plastid	48.68	37.12
PGSC0003DMT400042492	Potato	plastid	49.01	37.0
Solyc02g080620.2.1	Tomato	plastid	49.01	37.0
Bra016813.1-P	Field mustard	mitochondrion	46.36	36.55
CDY21012	Canola	mitochondrion	46.36	36.55
CDY31213	Canola	mitochondrion	45.7	36.13
Zm00001d047755_P006	Maize	plastid	45.36	34.95
KRH36465	Soybean	plastid	46.69	34.9
KRH02054	Soybean	plastid	45.03	33.83
Zm00001d025333_P001	Maize	plastid	46.69	33.65
Zm00001d005351_P001	Maize	plastid	46.69	33.41
Zm00001d003830_P001	Maize	plastid	46.03	32.63
Zm00001d028712_P007	Maize	plastid	44.37	31.31
Zm00001d048561_P001	Maize	plastid	37.42	29.12
CDY19368	Canola	cytosol	46.69	19.48

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A1D6ICV1	InterPro:ACT_dom
InterPro:Chor_mutase/pphenate_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004106	GO:GO:0004664	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0047769	InterPro:IPR001086
InterPro:IPR002912	ProteinID:ONM57669.1	PFAM:PF00800	PIRSF:PIRSF001500	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850
SUPFAM:SSF55021	UniParc:UPI000842FE52	EnsemblPlantsGene:Zm00001d021611	EnsemblPlants:Zm00001d021611_P001	EnsemblPlants:Zm00001d021611_T001	SEG:seg

Description

Arogenate dehydratase/prephenate dehydratase 2 chloroplastic

Coordinates

chr7:-:158049839..158052734

Molecular Weight (calculated)

33436.3 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.032

Length

302 amino acids

Sequence
(BLAST)

001: MCDVCVAYQG SPGTVIEAFV LKAFPECTTV PLQRSEAALE AVESSLADIA ILPIENAYTG SFHKSYDILL SHDLQIVQEV QMDVELCLLA LPGVHKDDLK
101: TIFSHPQYLA QCEHSISGLS VSKKNVDHGV VGAEIISKQN LRDSGVICSA RAAELYGLNI LECNFQLNFI QKYDTVKTKM LQDESPNVTR YLVLAKTANL
201: PKEHDQYKTS VVFGLEEGPG ALCKALGSFW KRGINLTKIE SRPNRGKPMR IRGTEKLFNY IFYVDFEASM TDVRAQNALK GLEEVASFLR VLGCYPCSTT
301: TI

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.