CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22575	Soybean	cytosol	61.98	92.61
VIT_12s0059g00750.t01	Wine grape	plastid	64.84	63.04
GSMUA_Achr8P15920_001	Banana	cytosol	52.08	61.54
GSMUA_Achr4P23700_001	Banana	plastid	58.59	54.88
KRH02054	Soybean	plastid	55.73	53.23
KRG89060	Soybean	plastid	53.12	52.99
KRH36465	Soybean	plastid	53.12	50.49
GSMUA_Achr7P00270_001	Banana	cytosol	34.11	50.19
KRH24944	Soybean	plastid	40.36	50.0
KRH22725	Soybean	plastid	53.39	48.35
Zm00001d021611_P001	Maize	cytosol	37.76	48.01
KRH26581	Soybean	plastid	53.12	48.0
KRH25168	Soybean	plastid	52.08	46.73
KRH30513	Soybean	plastid	52.08	46.73
KRG93965	Soybean	cytosol	8.85	41.46
Os07t0512000-01	Rice	mitochondrion	26.04	32.26

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:100792353	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A0R4J4R4
InterPro:ACT_dom	EMBL:ACUP02007744	EnsemblPlantsGene:GLYMA_12G193000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094	GO:GO:0009987	InterPro:IPR001086
InterPro:IPR002912	EnsemblPlants:KRH26772	ProteinID:KRH26772	ProteinID:KRH26772.1	PFAM:PF00800	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF12	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	SUPFAM:SSF53850
SUPFAM:SSF55021	UniParc:UPI000189DA24	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:35450459..35456613

Molecular Weight (calculated)

42818.2 Da

IEP (calculated)

6.907

GRAVY (calculated)

-0.146

Length

384 amino acids

Sequence
(BLAST)

001: MAVTSPLVVA GSQLRCHNFR RTRHWALTLS WEKQQLKRAQ KCGGDENPWK PVKIVMRVVD HHPRDGDVSY GLHKDLVSLP KPLSISDIVA ASDDHAKVRI
101: SYKGIPGSYS EDAALKAYPN CETVSCNDFE EAFKAVEIWW ADKVILPIEN TSGGSIHRNY DLLLRHRLHI VGEVQLATNL ALLALPGVRT EYLKRVLSHS
201: QAFELSDDFL TKLGVARENV DDTAGAAQII ASNGLYDAGA IASIRAAEIY GLNVLAERIQ DDSEIISRYL VLARDPIIPK ADKPFKTSIV FTLDEGPGVL
301: FKALAVFALR DINLNKIESR PQRNRPLRVV DDSNTGTAKY FDYLFYIDFD ASMTEPRAQT ALGHLQEFAT FLRVLGCYPI DTTI

Best Arabidopsis Sequence Match ( AT1G11790.1 )
(BLAST)

001: MALRCFPIWV CPQTTHHRSP LMGLAEFDAD KRRRFCLWEC SSSASQRAVT AIEGEIPFSR ELKKSSDELG LTQETQSLSF HRDLSMLPKP LTANSLYSSD
101: GDDSKVRISF QGIPGAYSET AALKAFPNCE TVPCEQFEAA FQAVELWLVD KAVLPIENSV GGSIHRNYDL LLRHRLHIVQ EVHLPVNHCL LGVPGVKKED
201: IKCVLSHPQA LDQCVNSLNN LGIQRISAKD TATAAQTVSS SGKIDVGAIA SVRAANIYGL DILAENIQDD VNNVTRFLIL AREPMIPRTD RPYKTSIVFS
301: LEEGPGVLFK ALAVFALRSI NLSKIESRPQ RRRPLRVVDG SNNGSAKYFD YLFYIDFEAS MADTRAQHAL GHLQEFASFI RILGCYPMDL VR

Arabidopsis Description

ADT1Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.