Factsheet for VIT_06s0004g03430.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	67.01	74.71
KRG89060	Soybean	plastid	73.2	73.77
CDY35951	Canola	plastid	71.39	73.09
KRH24944	Soybean	plastid	57.99	72.58
Bra029665.1-P	Field mustard	plastid	70.88	72.56
AT3G07630.3	Thale cress	plastid	70.88	72.18
CDY28030	Canola	plastid	69.85	72.07
GSMUA_Achr6P15520_001	Banana	cytosol	62.89	71.76
Bra001262.1-P	Field mustard	plastid	68.81	70.45
CDX74036	Canola	plastid	68.81	70.45
PGSC0003DMT400065276	Potato	plastid	71.13	69.7
CDY07984	Canola	plastid	67.53	69.13
Solyc11g072520.1.1	Tomato	plastid	68.56	67.68
Os07t0694600-01	Rice	plastid	58.76	62.64
TraesCS2B01G096300.1	Wheat	plastid	59.79	61.05
TraesCS2D01G080100.1	Wheat	plastid	59.79	60.73
TraesCS2A01G082200.1	Wheat	plastid	59.54	59.54
EER95050	Sorghum	plastid	59.02	59.48
HORVU4Hr1G057140.3	Barley	plastid	59.28	57.64
TraesCS4D01G198400.1	Wheat	plastid	59.28	57.64
TraesCS4A01G106500.1	Wheat	plastid	59.28	57.64
Os03t0286200-01	Rice	plastid	58.76	57.14
Zm00001d047755_P006	Maize	plastid	56.19	55.61
VIT_10s0116g01670.t01	Wine grape	plastid	55.93	54.8
VIT_12s0059g00750.t01	Wine grape	plastid	55.67	54.68
TraesCS4B01G197700.1	Wheat	plastid	55.93	54.52
TraesCS4D01G198200.1	Wheat	plastid	55.93	54.52
TraesCS4A01G106600.1	Wheat	plastid	55.15	53.9
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	56.96	53.77
HORVU4Hr1G057130.1	Barley	cytosol	12.89	52.63
HORVU2Hr1G013500.1	Barley	nucleus	54.9	52.46
Zm00001d028712_P007	Maize	plastid	55.67	50.47

Protein Annotations

KEGG:00400+4.2.1.51	EntrezGene:100245060	wikigene:100245060	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4
InterPro:ACT_dom	ProteinID:CBI16254	ProteinID:CBI16254.3	UniProt:D7SKS6	EMBL:FN594951	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
InterPro:IPR001086	InterPro:IPR002912	EntrezGene:LOC100245060	wikigene:LOC100245060	PFAM:PF00800	ScanProsite:PS00857
ScanProsite:PS00858	PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF3	InterPro:Preph_deHydtase
InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850	SUPFAM:SSF55021	UniParc:UPI00015C7C08	ArrayExpress:VIT_06s0004g03430	EnsemblPlantsGene:VIT_06s0004g03430
EnsemblPlants:VIT_06s0004g03430.t01	unigene:Vvi.2036	RefSeq:XP_002282017	RefSeq:XP_002282017.2	RefSeq:XP_010651108.1	:

Description

Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:D7SKS6]

Coordinates

chr6:+:4276500..4284000

Molecular Weight (calculated)

43194.5 Da

IEP (calculated)

8.937

GRAVY (calculated)

-0.279

Length

388 amino acids

Sequence
(BLAST)

001: MAASFSRSPI TPLHRQNNCK FPPLDPMARV HISTPGISSK RRCNISLAYV PNDNDENAKS RELQRSLEDF PSETLSKGSH SLPRPLSSTH LSNKLSDRSR
101: LRVAYQGVHG AYSESAAEKA YPNCQAVPCE QFETAFEAVE SWLVDRAVLP IENSLGGSIH RNYDLLLRHR LHIVGEVKFA VRHCLLANHG VKVEDLKRVL
201: SHSQALAQCE NTLTKLGLVR EAVDDTAGAA KFIAFHKLKD VGAVASSAAA RIYGLKILAQ DIQDDSYNVT RFLMLAREPI IPGTDRPFKT SIVFSLEEGP
301: GVLFKALAVF ALRQINLTKI ESRPLRNQPL RASNDTNNGS PKYFDYLFYV DFEASMADQN SQNALRHLKE FATFLRVLGS YPVDTSMI

Best Arabidopsis Sequence Match ( AT3G07630.3 )
(BLAST)

001: MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSNGSRVR
101: VAYQGVRGAY SESAAEKAYP NCEAVPCEEF DTAFEAVERW LVDRAVLPIE NSLGGSIHRN YDLLLRHNLH IVGEVKLAVR HCLLANHGVN IEDLRRVLSH
201: PQALAQCENT LTKLGLVREA VDDTAGAAKQ IAFENLNDAA AVASEKAAKI YGLNIVAKDI QDDCDNVTRF LMLAREPIIP GTNRLFKTSI VFSLEEGPGV
301: LFKALAVFAL RQINLTKIES RPLRKHPLRA SGGLKYFDYL FYVDFEASMA DEVAQNALRH LEEFATFLRV LGSYPVDTTM L

Arabidopsis Description

ADT2Arogenate dehydratase/prephenate dehydratase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SSE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.