CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98196	Canola	extracellular	35.71	47.87
CDX75178	Canola	cytosol	22.22	40.58
GSMUA_Achr6P17230_001	Banana	plastid	65.08	28.08
CDX92343	Canola	plastid	91.27	27.06
CDY26946	Canola	plastid	91.27	27.06
CDY30932	Canola	plastid	82.54	26.94
CDX77841	Canola	plastid	80.95	26.36
CDY09152	Canola	plastid	88.1	26.12
CDY59281	Canola	plastid	88.1	26.12
CDY30526	Canola	plastid	73.81	22.25
CDX77139	Canola	plastid	73.81	21.83
CDY06307	Canola	cytosol	63.49	20.3
CDY22691	Canola	cytosol	65.08	19.62
CDY72678	Canola	plastid	65.08	19.57
CDY22692	Canola	plastid	64.29	19.33
CDY28030	Canola	plastid	52.38	17.55
CDX74036	Canola	plastid	52.38	17.41
CDY35951	Canola	plastid	52.38	17.41
CDY07984	Canola	plastid	51.59	17.15
CDY21012	Canola	mitochondrion	46.83	15.4
CDY31213	Canola	mitochondrion	45.24	14.92
CDY19368	Canola	cytosol	50.0	8.7
KRG93965	Soybean	cytosol	0.79	1.22

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	GO:A0A078DHV1	EnsemblPlants:CDX88512	ProteinID:CDX88512
ProteinID:CDX88512.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009094	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00148065001	InterPro:IPR001086	PFAM:PF00800
PFscan:PS51171	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	MetaCyc:PWY-7432	InterPro:Preph_deHydtase	SUPFAM:SSF53850
UniPathway:UPA00121	UniParc:UPI0004EEC5AF	:	:	:	:

Description

BnaC06g39560D

Coordinates

chrLK031855:-:1386432..1387228

Molecular Weight (calculated)

13399.9 Da

IEP (calculated)

6.383

GRAVY (calculated)

-0.066

Length

126 amino acids

Sequence
(BLAST)

001: MIKASNGSVN LSLVPSETKN GKPGLVHPLT NTDLSPAPAH GSTLHVAYQG VPGSYSEAAA GKSYPNSEAI PCDQFDVAFQ AVELWIADRA VLPVENSLGG
101: SIHRNYDLLL RHLLHIVGQV QIPVHD

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.