Factsheet for Solyc11g066890.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g091710.2.1
Solyc05g053250.2.1
Solyc06g074530.1.1
Solyc11g066890.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	Solyc06g074530.1.1	AT3G44720.1	21798944
AT3G44720.1	Solyc11g066890.1.1	AT3G44720.1	21798944
AT3G44720.1	Solyc05g053250.2.1	AT3G54826.1	21798944
AT3G44720.1	Solyc02g091710.2.1	AT5G65683.1	21798944
AT5G22630.1	Solyc06g074530.1.1	AT3G44720.1	21798944
AT5G22630.1	Solyc11g066890.1.1	AT3G44720.1	21798944
AT5G22630.1	Solyc06g074530.1.1	AT5G22630.1	21798944
AT5G22630.1	Solyc11g066890.1.1	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068261	Potato	plastid	97.19	95.84
Solyc06g074530.1.1	Tomato	plastid	88.06	86.84
KRH22725	Soybean	plastid	79.86	80.42
KRH26581	Soybean	plastid	79.86	80.24
GSMUA_Achr8P07590_001	Banana	cytosol	53.4	80.0
KRH25168	Soybean	plastid	75.64	75.47
HORVU2Hr1G072210.1	Barley	cytosol, mitochondrion, plastid	62.53	75.42
KRH30513	Soybean	plastid	75.41	75.23
Os09t0565700-01	Rice	plastid	68.85	73.32
Zm00001d005351_P001	Maize	plastid	71.66	72.51
Os09t0566050-00	Rice	plastid	68.85	72.24
TraesCS2B01G308500.1	Wheat	plastid	70.02	72.22
CDX92343	Canola	plastid	71.66	72.0
TraesCS2A01G292000.1	Wheat	plastid	69.79	71.98
TraesCS2D01G290000.1	Wheat	plastid	69.79	71.98
CDY26946	Canola	plastid	71.43	71.76
TraesCS5B01G372500.1	Wheat	plastid	70.49	71.67
AT5G22630.1	Thale cress	plastid	71.19	71.53
HORVU5Hr1G092190.1	Barley	plastid	71.19	71.36
Zm00001d025333_P001	Maize	plastid	70.02	71.36
TraesCS5A01G370200.1	Wheat	plastid	70.26	71.09
Bra002423.1-P	Field mustard	plastid	71.9	71.06
TraesCS5D01G379700.1	Wheat	plastid	70.26	70.92
CDY59281	Canola	plastid	70.49	70.82
Zm00001d003830_P001	Maize	plastid	70.49	70.66
CDY09152	Canola	plastid	70.26	70.59
EES10725	Sorghum	plastid	70.73	69.91
Bra020203.1-P	Field mustard	plastid	70.49	69.68
EER96348	Sorghum	plastid	71.43	69.63
Bra019468.1-P	Field mustard	plastid	62.76	69.43
Os04t0406600-01	Rice	plastid	70.73	69.27
AT3G44720.1	Thale cress	plastid	68.38	68.87
CDY30932	Canola	plastid	62.06	68.65
TraesCS2B01G308400.1	Wheat	plastid	67.21	68.5
CDX77841	Canola	plastid	62.06	68.48
TraesCS2D01G289900.2	Wheat	plastid	66.04	67.79
GSMUA_AchrUn_...	Banana	plastid	61.12	65.58
GSMUA_Achr3P22810_001	Banana	plastid	59.72	65.22
GSMUA_Achr8P33080_001	Banana	plastid	65.34	63.99
GSMUA_Achr10P...	Banana	plastid	30.45	62.5
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	66.04	61.3
TraesCS2A01G291900.1	Wheat	plastid	66.51	61.08
Solyc11g072520.1.1	Tomato	plastid	50.35	54.71
Solyc02g080620.2.1	Tomato	plastid	50.59	54.0

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009094
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016829	GO:GO:0047769
InterPro:IPR001086	InterPro:IPR002912	UniProt:K4D9U6	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF14	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:Solyc11g066890.1	EnsemblPlants:Solyc11g066890.1.1	UniParc:UPI000276A153	SEG:seg

Description

Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:K4D9U6]

Coordinates

chr11:-:52689013..52690296

Molecular Weight (calculated)

46456.4 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.116

Length

427 amino acids

Sequence
(BLAST)

001: MQSLTPSSSG INLKSLIQTK IRSNRVNSIR PVITCVYRFD AANAAVNTGT ANTNSAGHAG GSRADWQSSC AILASKVVSQ QQNAEKSGGA GNITAVNGHK
101: AAIDLDLVPI DNQPKPLTIT DLSPAPMHGA QLRVAYQGVP GAYSEAAAGK AYPKCEAIPC DQFEVAFQAV ELWIADRAVL PVENSLGGSI HRNYDLLLRH
201: RLHIVGEVQL PVHHCLLALP GVRKEYLNRV ISHPQALAQC ELTLTKLGLN VTREAVDDTA GAAEYIASHN LRDTAAIASA RAADLYGLQI LAEGIQDDSS
301: NVTRFVMLAR EPIIPRTDRP FKTSIVFAHD KGTSVLFKVL SAFAFRNISL TKIESRPHRN RPIRLVDDAN VGTAKHFEYM FYVDFEASMA DVRAQNALAE
401: VQEFTSFLRV LGSYPMDMTP WCPSRED

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.