Factsheet for TraesCS2A01G291900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G045100.1
TraesCS2A01G291900.1
TraesCS2A01G292000.1
TraesCS2B01G057300.1
TraesCS2B01G308400.1
TraesCS2B01G308500.1
TraesCS2D01G043700.1
TraesCS2D01G289900.2
TraesCS2D01G290000.1
TraesCS5A01G370200.1
TraesCS5B01G372500.1
TraesCS5D01G379700.1
TraesCS6A01G395100.1
TraesCS6B01G435000.1
TraesCS6D01G380400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	TraesCS2A01G291900.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2A01G292000.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2B01G308400.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2B01G308500.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS2D01G289900.2	AT3G44720.1	21798944
AT3G44720.1	TraesCS2D01G290000.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS5A01G370200.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS5B01G372500.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS5D01G379700.1	AT3G44720.1	21798944
AT3G44720.1	TraesCS6A01G395100.1	AT3G54826.1	21798944
AT3G44720.1	TraesCS6B01G435000.1	AT3G54826.1	21798944
AT3G44720.1	TraesCS6D01G380400.1	AT3G54826.1	21798944
AT3G44720.1	TraesCS2A01G045100.1	AT5G65683.1	21798944
AT3G44720.1	TraesCS2B01G057300.1	AT5G65683.1	21798944
AT3G44720.1	TraesCS2D01G043700.1	AT5G65683.1	21798944
AT5G22630.1	TraesCS2A01G291900.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2A01G292000.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2B01G308400.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2B01G308500.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2D01G289900.2	AT3G44720.1	21798944
AT5G22630.1	TraesCS2D01G290000.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS5A01G370200.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS5B01G372500.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS5D01G379700.1	AT3G44720.1	21798944
AT5G22630.1	TraesCS2A01G291900.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2A01G292000.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2B01G308400.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2B01G308500.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS2D01G289900.2	AT5G22630.1	21798944
AT5G22630.1	TraesCS2D01G290000.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS5A01G370200.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS5B01G372500.1	AT5G22630.1	21798944
AT5G22630.1	TraesCS5D01G379700.1	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G308400.1	Wheat	plastid	87.1	96.66
TraesCS2D01G289900.2	Wheat	plastid	86.24	96.39
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	90.32	91.3
TraesCS2A01G292000.1	Wheat	plastid	72.9	81.88
Zm00001d025333_P001	Maize	plastid	71.83	79.71
Zm00001d003830_P001	Maize	plastid	72.26	78.87
EES10725	Sorghum	plastid	72.26	77.78
Os04t0406600-01	Rice	plastid	72.69	77.52
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	62.37	70.56
TraesCS5A01G370200.1	Wheat	plastid	63.87	70.38
CDY06307	Canola	cytosol	58.49	69.04
AT1G08250.1	Thale cress	plastid	61.29	69.01
Bra031620.1-P	Field mustard	cytosol	58.28	68.78
KRH26581	Soybean	plastid	61.94	67.76
KRH22725	Soybean	plastid	61.72	67.69
Bra034372.1-P	Field mustard	plastid	60.43	67.22
CDY30526	Canola	plastid	60.43	67.22
Solyc06g074530.1.1	Tomato	plastid	62.58	67.21
PGSC0003DMT400018339	Potato	plastid	62.58	67.21
PGSC0003DMT400068261	Potato	plastid	61.94	66.51
Solyc11g066890.1.1	Tomato	plastid	61.08	66.51
CDX77139	Canola	plastid	60.43	65.96
GSMUA_Achr10P...	Banana	plastid	29.46	65.87
AT2G27820.1	Thale cress	plastid	60.0	65.8
CDY22691	Canola	cytosol	58.49	65.07
KRH30513	Soybean	plastid	59.57	64.72
KRH25168	Soybean	plastid	59.35	64.49
CDY72678	Canola	plastid	56.56	62.77
CDX92343	Canola	plastid	57.2	62.59
Bra031619.1-P	Field mustard	plastid	56.34	62.53
CDY22692	Canola	plastid	56.34	62.53
AT3G44720.1	Thale cress	plastid	56.99	62.5
CDY26946	Canola	plastid	56.77	62.12
CDY09152	Canola	plastid	56.77	62.12
AT5G22630.1	Thale cress	plastid	56.34	61.65
CDY59281	Canola	plastid	56.34	61.65
Bra002423.1-P	Field mustard	plastid	57.2	61.57
Bra020203.1-P	Field mustard	plastid	56.77	61.11
Bra019468.1-P	Field mustard	plastid	50.32	60.62
CDY30932	Canola	plastid	49.68	59.84
CDX77841	Canola	plastid	49.25	59.17
TraesCS2A01G082200.1	Wheat	plastid	43.44	52.06
TraesCS4A01G106500.1	Wheat	plastid	43.44	50.63
TraesCS4A01G106600.1	Wheat	plastid	40.86	47.86
TraesCS1A01G188000.1	Wheat	plastid	31.83	37.19

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	InterPro:ACT_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009094
GO:GO:0009987	InterPro:IPR001086	InterPro:IPR002912	PFAM:PF00800	ScanProsite:PS00857	ScanProsite:PS00858
PFscan:PS51171	PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF13	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS
SUPFAM:SSF53850	SUPFAM:SSF55021	EnsemblPlantsGene:TraesCS2A01G291900	EnsemblPlants:TraesCS2A01G291900.1	TIGR:cd04905	TIGR:cd13631
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:502824857..502826254

Molecular Weight (calculated)

50013.5 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.022

Length

465 amino acids

Sequence
(BLAST)

001: MPFHIPFPSQ LLAFEAAPAT SFSFLVSYSS SNSNRGSRAD WCGRLAMAVV NFVKAHIGQS PKLQGRTPRR GSGVVRSSLQ GAVVGNRAEW LTSCAVLSSK
101: VAALAPHSTN SHLALAVAAS NGAVLDLIPL ETVDGSARHL PAPLRIADLS PAPMHGSELR VAYQGVPGAY SEKASGKAYP GSDAIPCDQF EVAFQAVENW
201: IADRAVLPVE NSLGGSIHRN YDLLLRHRLH IVGEVQLPVH HCLLVLPGVR KEDITRVISH PQALAQCEHT LTRMPGLNAA REAFDDTAGA AEHVAANSLR
301: DTAAIASSRA AELYGMEVLA DGIQDDSGNV TRFVMLAREP IVPRMDRPFK TSIVFAHDKE GTSVLFKVLS AFAFRDISLT KIESRPHRPI RLADDADSGT
401: APKQFEYMFY VDFQASLADP RVQNALAEVQ EFTSFLRVLG SYPMDMTPMA AGVASLDSSS AYSSS

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.