Factsheet for HORVU2Hr1G072210.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G072180.1
HORVU2Hr1G072210.1
HORVU5Hr1G092190.1
HORVU6Hr1G091500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44720.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT3G44720.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT3G44720.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT3G44720.1	HORVU6Hr1G091500.1	AT3G54826.1	21798944
AT5G22630.1	HORVU2Hr1G072180.1	AT3G44720.1	21798944
AT5G22630.1	HORVU2Hr1G072210.1	AT3G44720.1	21798944
AT5G22630.1	HORVU5Hr1G092190.1	AT3G44720.1	21798944
AT5G22630.1	HORVU2Hr1G072180.1	AT5G22630.1	21798944
AT5G22630.1	HORVU2Hr1G072210.1	AT5G22630.1	21798944
AT5G22630.1	HORVU5Hr1G092190.1	AT5G22630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G290000.1	Wheat	plastid	89.27	76.33
TraesCS2B01G308500.1	Wheat	plastid	89.27	76.33
TraesCS2A01G292000.1	Wheat	plastid	89.27	76.33
Zm00001d025333_P001	Maize	plastid	84.18	71.12
Zm00001d003830_P001	Maize	plastid	85.03	70.66
EES10725	Sorghum	plastid	85.03	69.68
Os04t0406600-01	Rice	plastid	85.31	69.27
GSMUA_Achr10P...	Banana	plastid	38.98	66.35
VIT_06s0061g01300.t01	Wine grape	mitochondrion, plastid	76.84	66.18
HORVU5Hr1G092190.1	Barley	plastid	79.38	65.96
CDY06307	Canola	cytosol	72.32	64.97
Bra031620.1-P	Field mustard	cytosol	72.03	64.72
AT1G08250.1	Thale cress	plastid	75.14	64.41
KRH22725	Soybean	plastid	76.55	63.92
KRH26581	Soybean	plastid	76.27	63.53
Bra034372.1-P	Field mustard	plastid	74.58	63.16
CDY30526	Canola	plastid	74.58	63.16
Solyc11g066890.1.1	Tomato	plastid	75.42	62.53
PGSC0003DMT400018339	Potato	plastid	76.27	62.36
Solyc06g074530.1.1	Tomato	plastid	75.99	62.12
CDX77139	Canola	plastid	74.58	61.97
PGSC0003DMT400068261	Potato	plastid	75.42	61.66
CDY22691	Canola	cytosol	72.6	61.48
HORVU2Hr1G072180.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	79.66	61.3
AT2G27820.1	Thale cress	plastid	73.16	61.08
KRH25168	Soybean	plastid	73.16	60.51
KRH30513	Soybean	plastid	72.88	60.28
CDY72678	Canola	plastid	68.93	58.23
Bra031619.1-P	Field mustard	plastid	68.64	58.0
AT3G44720.1	Thale cress	plastid	69.21	57.78
CDY22692	Canola	plastid	68.36	57.76
CDX92343	Canola	plastid	69.21	57.65
AT5G22630.1	Thale cress	plastid	68.93	57.41
CDY26946	Canola	plastid	68.93	57.41
Bra002423.1-P	Field mustard	plastid	69.49	56.94
CDY09152	Canola	plastid	68.36	56.94
CDY59281	Canola	plastid	68.08	56.71
Bra020203.1-P	Field mustard	plastid	68.36	56.02
Bra019468.1-P	Field mustard	plastid	60.17	55.18
CDY30932	Canola	plastid	59.04	54.15
CDX77841	Canola	plastid	59.04	54.01
HORVU4Hr1G057140.3	Barley	plastid	54.24	48.12
HORVU2Hr1G013500.1	Barley	nucleus	53.67	46.8
HORVU4Hr1G057130.1	Barley	cytosol	12.43	46.32
HORVU1Hr1G048860.1	Barley	plastid	39.83	35.16
HORVU3Hr1G041870.1	Barley	plastid	8.76	22.46
HORVU6Hr1G060430.1	Barley	plastid	7.91	21.05
HORVU1Hr1G023740.1	Barley	plastid	8.76	20.67

Protein Annotations

KEGG:00400+4.2.1.51	Gene3D:3.30.70.260	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A287IES8	InterPro:ACT_dom
InterPro:Chor_mutase/pphenate_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004106	GO:GO:0004664	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009073	GO:GO:0009094	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016829	GO:GO:0047769	EnsemblPlantsGene:HORVU2Hr1G072210	EnsemblPlants:HORVU2Hr1G072210.1	InterPro:IPR001086
InterPro:IPR002912	PFAM:PF00800	PIRSF:PIRSF001500	ScanProsite:PS00857	ScanProsite:PS00858	PFscan:PS51171
PFscan:PS51671	PANTHER:PTHR21022	PANTHER:PTHR21022:SF13	InterPro:Preph_deHydtase	InterPro:Preph_deHydtase_CS	SUPFAM:SSF53850
SUPFAM:SSF55021	UniParc:UPI000B471A17	SEG:seg	:	:	:

Description

Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A287IES8]

Coordinates

chrchr2H:+:517227969..517229326

Molecular Weight (calculated)

38753.2 Da

IEP (calculated)

6.953

GRAVY (calculated)

-0.193

Length

354 amino acids

Sequence
(BLAST)

001: TRPHQATTRS TPTPLPSFQL KPATQTNQSP PIYPLPPSPS PLSFPIEQLR XXVAYQGVPG AYSEKAAGKA YPGCDAIPCD QFEVAFQAVE LWIADRAVLP
101: VENSLGGSIH RNYDLLLRHR LHIVGEVQLP VHHCLLALPG VRKENITRVI SHPQALAQCE HTITRMGLNV VREAFDDTAG AAEYVATNGL RDTAAIASSR
201: AAELYGMEIL ADGIQDDCGN VTRFVMLARE PIVPRTDRPF KTSIVFAHDK EGTSVLFKVL SAFAFRDITL TKIESRPHRH RPIRLVDDAN RGTAKHFEYM
301: FYVDFQASLA EPRAQNALAE VQEFTSFLRV LGSYPMDMTP MTAGSSSTVT SSDS

Best Arabidopsis Sequence Match ( AT1G08250.1 )
(BLAST)

001: MKALSSSSPI LGASQPATAT ALIARSGRSE WQSSCAILTS KVISQEESES LPVPPVSGGV DHLNGHNSAA ARVPGMNLVP IEKSDSNPLV PQHRHNPLKP
101: LSMTDLSPAP MHGSNLRVAY QGVPGAYSEA AAGKAYPNCQ AIPCDQFEVA FQAVELWIAD RAVLPVENSL GGSIHRNYDL LLRHRLHIVG EVQLPVHHCL
201: LALPGVRKEF LTRVISHPQG LAQCEHTLTK LGLNVAREAV DDTAGAAEFI ASNNLRDTAA IASARAAEIY GLEILEDGIQ DDVSNVTRFV MLAREPIIPR
301: TDRPFKTSIV FAHEKGTSVL FKVLSAFAFR DISLTKIESR PNHNRPIRVV DDANVGTAKH FEYMFYVDFE ASMAEARAQN ALAEVQEFTS FLRVLGSYPM
401: DMTPWSPTSS TSS

Arabidopsis Description

ADT6Arogenate dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178W954]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.