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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G435000.1 Wheat mitochondrion 75.95 93.26
TraesCS6D01G380400.1 Wheat mitochondrion 73.84 87.5
TraesCS6A01G395100.1 Wheat plastid 86.5 85.06
Os02t0819700-01 Rice mitochondrion 54.85 69.15
Zm00001d018501_P001 Maize mitochondrion 48.95 62.03
EES07768 Sorghum mitochondrion 50.21 49.58
GSMUA_Achr4P04340_001 Banana mitochondrion 36.29 45.74
Bra003197.1-P Field mustard mitochondrion 34.6 43.62
KRH34848 Soybean mitochondrion 34.6 43.62
CDY07518 Canola mitochondrion 34.6 43.39
CDX67612 Canola mitochondrion 34.6 43.39
VIT_13s0019g04580.t01 Wine grape mitochondrion 34.6 42.71
Bra007101.1-P Field mustard mitochondrion 34.6 41.84
KRG91929 Soybean mitochondrion 33.33 41.8
PGSC0003DMT400069831 Potato mitochondrion 32.07 37.44
Solyc05g053250.2.1 Tomato mitochondrion 31.65 36.95
AT3G54826.1 Thale cress mitochondrion, plastid 34.6 36.77
CDX78266 Canola plastid 34.6 35.5
CDX73445 Canola plastid 34.6 35.5
Protein Annotations
EnsemblPlants:HORVU6Hr1G091500.1EnsemblPlantsGene:HORVU6Hr1G091500GO:GO:0003674GO:GO:0005488GO:GO:0008270GO:GO:0046872
InterPro:IPR007853InterPro:Mt_import_TIM15InterPro:Znf_DNL-typPANTHER:PTHR20922PANTHER:PTHR20922:SF13PFAM:PF05180
PFscan:PS51501SEG:segUniParc:UPI000B4897ACUniProt:A0A287V6X6MapMan:35.2:
Description
No Description!
Coordinates
chrchr6H:+:575693427..575695500
Molecular Weight (calculated)
25399.2 Da
IEP (calculated)
9.203
GRAVY (calculated)
-0.313
Length
237 amino acids
Sequence
(BLAST)
001: CASRATVKKS RAERLATLSL CSARLLLSSP ARRRRAPLPS VAGRHAMAAG RFLPLACRRI IAALSQPSAP SSRGIFFPSP ATAGLRSLQT IIEASSNASD
101: ERHHDPEDHK TDTLPQPASV PAAAESSFMV RDASSLKISP RHDMAMIFTC KVCETRSVKM ASRDSYDNGV VVARCGGCNN LHLMADRLGW FGQPGSIEDF
201: LAAQGQDVKK GDTDTFSFTL EDLAGSQVKS KEPSGEN
Best Arabidopsis Sequence Match ( AT3G54826.1 )
(BLAST)
001: MIKKASFIVL RFQNFTENRS VEFLLSLRLS MAARLLALRR ALSLFSNQQH RFPLSQVSTE QLSLSNSLFS RSHVYGRLFQ RQLSVIREAN EASVTNVCNS
101: SNSATESAKV PSPATPSEEM MVKYKSQLKI NPRHDFMMVF TCKVCDTRSM KMASRESYEN GVVVVRCGGC DNLHLIADRR GWFGEPGSVE DFLASQGEEF
201: KKGSMDSLNL TPEDLAGGKI STE
Arabidopsis Description
Zim17-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:F4JE34]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.