Factsheet for HORVU7Hr1G100540.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G038680.8
HORVU1Hr1G075560.1
HORVU1Hr1G079910.1
HORVU3Hr1G039500.1
HORVU3Hr1G097420.1
HORVU4Hr1G012580.5
HORVU4Hr1G071510.2
HORVU4Hr1G078820.3
HORVU5Hr1G015120.1
HORVU5Hr1G052630.2
HORVU5Hr1G078170.27
HORVU5Hr1G092770.2
HORVU5Hr1G092900.2
HORVU5Hr1G109710.2
HORVU5Hr1G122800.4
HORVU6Hr1G093960.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G19700.1	HORVU1Hr1G075560.1	AT1G45145.1	21798944
AT4G19700.1	HORVU3Hr1G039500.1	AT2G24570.1	21798944
AT4G19700.1	HORVU3Hr1G097420.1	AT2G24570.1	21798944
AT4G19700.1	HORVU4Hr1G012580.5	AT2G24570.1	21798944
AT4G19700.1	HORVU5Hr1G015120.1	AT2G24570.1	21798944
AT4G19700.1	HORVU5Hr1G052630.2	AT2G24570.1	21798944
AT4G19700.1	HORVU5Hr1G092770.2	AT2G24570.1	21798944
AT4G19700.1	HORVU5Hr1G122800.4	AT2G24570.1	21798944
AT4G19700.1	HORVU1Hr1G038680.8	AT2G33210.1	21798944
AT4G19700.1	HORVU4Hr1G071510.2	AT2G33210.1	21798944
AT4G19700.1	HORVU4Hr1G078820.3	AT2G33210.1	21798944
AT4G19700.1	HORVU5Hr1G078170.27	AT2G43370.1	21798944
AT4G19700.1	HORVU1Hr1G079910.1	AT3G13860.1	21798944
AT4G19700.1	HORVU5Hr1G109710.2	AT4G02770.1	21798944
AT4G19700.1	HORVU3Hr1G039500.1	AT4G31550.1	21798944
AT4G19700.1	HORVU3Hr1G097420.1	AT4G31550.1	21798944
AT4G19700.1	HORVU4Hr1G012580.5	AT4G31550.1	21798944
AT4G19700.1	HORVU5Hr1G015120.1	AT4G31550.1	21798944
AT4G19700.1	HORVU5Hr1G052630.2	AT4G31550.1	21798944
AT4G19700.1	HORVU5Hr1G092770.2	AT4G31550.1	21798944
AT4G19700.1	HORVU5Hr1G122800.4	AT4G31550.1	21798944
AT4G19700.1	HORVU6Hr1G093960.1	AT5G08330.1	21798944
AT4G19700.1	HORVU5Hr1G092900.2	AT5G38640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G100520.1	Barley	cytosol, mitochondrion	76.97	76.22
TraesCS7D01G431300.1	Wheat	mitochondrion	77.63	75.4
TraesCS7B01G340600.1	Wheat	mitochondrion	77.3	75.32
TraesCS7A01G442100.1	Wheat	mitochondrion	77.63	75.16
TraesCS7A01G441900.1	Wheat	mitochondrion	77.96	75.0
TraesCS7D01G431200.1	Wheat	mitochondrion	75.66	74.68
TraesCS7D01G431100.1	Wheat	mitochondrion, nucleus	76.97	74.52
TraesCS7A01G442300.1	Wheat	mitochondrion	77.63	74.45
TraesCS7B01G340500.1	Wheat	mitochondrion	76.64	73.97
TraesCS7B01G340700.1	Wheat	mitochondrion	74.67	72.76
HORVU4Hr1G003180.3	Barley	mitochondrion	71.38	70.68
HORVU6Hr1G021960.1	Barley	plastid	44.08	51.34
HORVU6Hr1G021880.1	Barley	plastid	44.08	51.34
GSMUA_Achr4P23050_001	Banana	nucleus	24.67	39.89
Zm00001d013571_P001	Maize	cytosol, nucleus, plastid	43.09	39.7
GSMUA_Achr7P00850_001	Banana	plastid	29.28	38.7
EER91098	Sorghum	nucleus	44.74	38.31
GSMUA_Achr4P28300_001	Banana	nucleus	30.26	38.17
GSMUA_Achr5P02100_001	Banana	plastid	30.59	38.11
GSMUA_Achr2P13160_001	Banana	plastid	30.92	38.06
GSMUA_Achr4P32070_001	Banana	nucleus	33.22	35.31
GSMUA_Achr6P31690_001	Banana	nucleus	34.21	34.9
Zm00001d033419_P001	Maize	plastid	30.92	33.57
CDY21311	Canola	cytosol	25.0	32.48
CDX94520	Canola	cytosol	25.0	32.48
CDY07541	Canola	cytosol	25.0	32.48
CDY09318	Canola	cytosol	25.0	32.48
GSMUA_Achr9P09830_001	Banana	nucleus	33.88	32.09
KRH43767	Soybean	nucleus	26.64	32.02
VIT_10s0042g01070.t01	Wine grape	nucleus	31.58	31.68
VIT_19s0027g00740.t01	Wine grape	nucleus	31.91	31.39
PGSC0003DMT400062617	Potato	nucleus	30.92	31.33
Bra035092.1-P	Field mustard	nucleus	32.57	31.33
CDX87407	Canola	nucleus	32.57	31.33
CDX88507	Canola	nucleus	29.93	30.54
KRH11729	Soybean	nucleus	30.59	29.71
Solyc02g031710.2.1	Tomato	nucleus	30.26	29.68
PGSC0003DMT400026783	Potato	cytosol, mitochondrion, nucleus, plastid, vacuole	31.25	29.41
KRH36722	Soybean	nucleus	29.93	29.35
AT5G45100.1	Thale cress	cytosol	28.29	29.25
AT4G19700.1	Thale cress	cytosol	28.62	28.62
KRH50476	Soybean	cytosol, nucleus, plastid	29.93	28.44
CDY26402	Canola	cytosol	27.63	28.38
Bra039533.1-P	Field mustard	cytosol, nucleus, plastid	27.63	28.38
AT3G12920.1	Thale cress	nucleus	31.25	28.36
KRG89416	Soybean	nucleus	29.28	28.34
KRH13682	Soybean	nucleus	31.25	28.19
CDY71192	Canola	cytosol	25.66	27.86
CDY43390	Canola	cytosol	29.61	27.69
Bra039354.1-P	Field mustard	cytosol	29.61	27.69
CDY01615	Canola	cytosol	27.63	27.54
CDY51918	Canola	cytosol	25.99	27.53
Bra013423.1-P	Field mustard	nucleus	26.64	27.36
CDX79294	Canola	nucleus	27.3	27.3
CDY13070	Canola	cytosol	25.0	27.24
Bra027588.1-P	Field mustard	cytosol, nucleus, plastid	25.0	27.24
CDY24237	Canola	nucleus	28.95	27.16
CDY71607	Canola	cytosol	27.3	27.12
Bra012532.1-P	Field mustard	nucleus	27.3	27.12
CDY64561	Canola	nucleus	30.26	27.06
Bra001477.1-P	Field mustard	nucleus	30.26	27.06
Bra034718.1-P	Field mustard	nucleus	29.93	27.0
CDX82568	Canola	nucleus	29.93	26.76
CDY18062	Canola	cytosol	24.67	26.6
Bra028364.1-P	Field mustard	cytosol, nucleus, plastid	24.67	26.6
CDY46345	Canola	cytosol	24.67	26.6
Solyc02g069180.2.1	Tomato	plastid	24.01	25.8
AT1G79110.1	Thale cress	nucleus	30.26	25.7
HORVU1Hr1G054930.3	Barley	cytosol	22.37	20.73
HORVU6Hr1G066640.4	Barley	nucleus	22.37	19.83
CDY23552	Canola	cytosol	13.16	18.43
HORVU6Hr1G015410.5	Barley	cytosol, mitochondrion, nucleus	18.75	15.45
HORVU4Hr1G061210.1	Barley	cytosol	19.41	14.29

Protein Annotations

EnsemblPlants:HORVU7Hr1G100540.2	EnsemblPlantsGene:HORVU7Hr1G100540	Gene3D:3.30.40.10	InterPro:E3ligase_BOI_like	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR42647	PANTHER:PTHR42647:SF12	PFAM:PF13920	PFscan:PS50089
PIRSF:PIRSF036836	SEG:seg	UniParc:UPI000B46C6C9	UniProt:A0A287XKI7	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:-:605454276..605455717

Molecular Weight (calculated)

32388.6 Da

IEP (calculated)

7.287

GRAVY (calculated)

-0.318

Length

304 amino acids

Sequence
(BLAST)

001: MAVDLQRLRH MLLTTGAGAG AGDHQRASAA AMPASGPCYG AAVPTQRGHQ PCADLFTPPP PTTTTTSAAD QCSEFLPMNA VGLAKKGVRP DAAQEISTNK
101: RKRDERSPVL GAADVLAAHV QQQTIDVDGI LLKQAKKMWT ALAEQRQSHM RLIVSTVEGR AAQRLKAKDE EIERIRTMNW SLEARLQNLF MEAQMWRDVA
201: QSNEATANVL RGDLRRVLDA QAVGGGGSGG DQDDAESCCW GENEVAEERP ETGVGRCKAC REGTAVVLLL PCRHLCVCAP CAATAQACPS CGSAKNGSVC
301: INFP

Best Arabidopsis Sequence Match ( AT3G12920.1 )
(BLAST)

001: MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS
101: REESVVLNPS AYMQIQKNPT DPLMFLGQDL SSNVQQHHFD IDRLISNHVE RMRMEIEEKR KTQGRRIVEA VEQGLMKTLR AKDDEINHIG KLNLFLEEKV
201: KSLCVENQIW RDVAQSNEAT VNALRSNLQQ VLAAVERNRW EEPPTVADDA QSCCGSNDEG DSEEERWKLA GEAQDTKKMC RVGMSMCRSC GKGEASVLLL
301: PCRHMCLCSV CGSSLNTCPI CKSPKTASLH VNLSS

Arabidopsis Description

BRG3Probable BOI-related E3 ubiquitin-protein ligase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.