Factsheet for HORVU4Hr1G071510.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G266200.1	Wheat	cytosol	42.84	73.49
KXG40202	Sorghum	cytosol	27.81	48.65
Os03t0143400-01	Rice	mitochondrion	36.66	45.23
KRG90277	Soybean	mitochondrion	34.83	43.13
KRH34594	Soybean	mitochondrion	34.83	42.98
VIT_05s0051g00340.t01	Wine grape	mitochondrion	34.69	42.96
KRH33513	Soybean	mitochondrion	34.69	42.96
AT3G23990.1	Thale cress	mitochondrion	34.69	42.81
PGSC0003DMT400030265	Potato	mitochondrion	34.55	42.78
KRG92192	Soybean	mitochondrion	34.55	42.78
CDX93002	Canola	mitochondrion	33.01	42.73
GSMUA_Achr10P...	Banana	mitochondrion	34.27	42.43
Solyc05g053470.2.1	Tomato	plastid	34.13	42.41
PGSC0003DMT400069855	Potato	mitochondrion	34.13	42.41
CDX94835	Canola	mitochondrion	34.27	42.29
Bra001934.1-P	Field mustard	mitochondrion	34.27	42.29
Solyc09g091180.2.1	Tomato	extracellular, mitochondrion, nucleus, unclear	34.27	42.14
GSMUA_Achr1P11160_001	Banana	mitochondrion	33.85	41.7
HORVU4Hr1G078820.3	Barley	plastid	36.94	41.68
CDY72107	Canola	mitochondrion	17.84	41.37
AT2G33210.1	Thale cress	mitochondrion	33.85	41.2
Bra021836.1-P	Field mustard	cytosol	25.56	40.72
CDX84697	Canola	mitochondrion	32.16	40.67
Bra022931.1-P	Field mustard	mitochondrion	31.04	39.68
CDY17152	Canola	mitochondrion	31.88	39.55
CDY19471	Canola	mitochondrion	32.87	39.46
Bra005514.1-P	Field mustard	mitochondrion	30.76	39.18
CDY59050	Canola	cytosol	18.54	39.05
HORVU1Hr1G038680.8	Barley	mitochondrion	36.24	38.56
CDY59049	Canola	mitochondrion	11.66	38.07
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	29.78	36.49
CDY66712	Canola	mitochondrion	30.76	36.32
CDX79518	Canola	cytosol	10.25	36.14
CDY37741	Canola	mitochondrion	29.21	34.04
GSMUA_Achr10P...	Banana	cytosol	6.32	32.61
HORVU7Hr1G006490.2	Barley	cytosol	21.49	27.62
HORVU2Hr1G077410.18	Barley	plastid	22.05	26.43
HORVU6Hr1G005220.3	Barley	plastid	21.21	25.25
HORVU0Hr1G038830.17	Barley	plastid	20.37	24.58
HORVU6Hr1G000180.2	Barley	plastid	22.33	24.42
HORVU5Hr1G125130.1	Barley	plastid	19.94	24.19
HORVU4Hr1G076680.1	Barley	cytosol	6.6	23.74
HORVU2Hr1G107410.2	Barley	cytosol	6.6	23.5
HORVU5Hr1G074160.1	Barley	cytosol	6.04	22.05
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	18.96	21.63
HORVU4Hr1G066820.2	Barley	cytosol	6.88	20.85
HORVU2Hr1G011340.1	Barley	cytosol	4.21	18.18
HORVU2Hr1G109400.1	Barley	cytosol	1.12	8.7

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A287PKV7	InterPro:Chaperonin_Cpn60_CS
InterPro:Chaprnin_Cpn60	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU4Hr1G071510	EnsemblPlants:HORVU4Hr1G071510.2
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296
PANTHER:PTHR11353	PANTHER:PTHR11353:SF85	InterPro:Papain_like_cys_pep_sf	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54001
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B481247	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:580891312..580918944

Molecular Weight (calculated)

79089.8 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.194

Length

712 amino acids

Sequence
(BLAST)

001: MGRRKVEFEK ITRSMEKSWH TSLYKDCNIV PEAEDQRPFP TCVFCSFTKG GQMEMHRIFA DEGIPCDICL FPKSMVEDYL TMNGINMSSF CQNKDFLHRS
101: LTASLIFEAY GVEATSYLWE GTTRLAMEAC PYLGDSITFD QLKELLNKGK PVLAMMIVGP DFEKLRDKEI YKCHPVFLSG KLQKPFEYHR VILIGHGVTE
201: VTKENFVPFL NSHSDKFGHK GVGRAYFNDL MWFFTLEGKY PPLLQYQPPK IIPLDRPNLD KPRRRPACDN RRNLDKPWRR SECDIGTVEQ TEASGRADAA
301: SSWRLDMPQQ IAKVNNGTAW NGTTCLHVLT KEIVDQGCKL MASGMIGIDL RDGICMAVDD VVRNLMSMAR KINTFEEIAQ VGTVSANGEK ELGDLIAEAI
401: AMVGTEGVIT IADGSTRCTE LQVLECIKLK RGYFTKHFIT NHKNKTCELD DPLIFIHDKR VSNVQAIKVL EFALMEGKPL FILAEDVDTE AINTMINEKY
501: YKGMKVCAVK VPGHGENKEL NLLAICLLTG GLIFTEGNGM DLWPHILGTS KKVSVSADDC TIFGGAADDN TIGNRTKQLR SATEKSTGLA EMYCCATIMK
601: IGGMDKMEII EKKDRAAHAL NATKAAVEEG IVPGGGVALV YAAKDLDKLE TANVGQKSGV QIIQNVLKIP FHTNASSACR DGEDIVSMIL EQNNTGLVYD
701: AAKGRAPSLF LV

Best Arabidopsis Sequence Match ( AT2G33210.1 )
(BLAST)

001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF

Arabidopsis Description

HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.