Factsheet for Bra005514.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17152	Canola	mitochondrion	99.82	97.21
Bra022931.1-P	Field mustard	mitochondrion	95.89	96.23
AT2G33210.1	Thale cress	mitochondrion	91.95	87.86
Bra001934.1-P	Field mustard	mitochondrion	84.97	82.32
GSMUA_Achr10P...	Banana	mitochondrion	83.18	80.87
Os10t0462900-01	Rice	mitochondrion	83.01	80.84
PGSC0003DMT400069855	Potato	mitochondrion	82.83	80.8
Solyc05g053470.2.1	Tomato	plastid	82.47	80.45
Zm00001d014090_P002	Maize	mitochondrion	82.83	80.24
Zm00001d032789_P001	Maize	plastid	82.65	80.21
Os03t0143400-01	Rice	mitochondrion	82.65	80.07
PGSC0003DMT400030265	Potato	mitochondrion	82.29	80.0
TraesCS1A01G145000.1	Wheat	mitochondrion	82.11	79.97
TraesCS1B01G162300.1	Wheat	mitochondrion	82.11	79.97
TraesCS1D01G144000.1	Wheat	mitochondrion	82.11	79.97
EER94121	Sorghum	mitochondrion	82.47	79.9
GSMUA_Achr1P11160_001	Banana	mitochondrion	82.29	79.58
Solyc09g091180.2.1	Tomato	extracellular, mitochondrion, nucleus, unclear	81.93	79.1
TraesCS4A01G409100.1	Wheat	mitochondrion	81.04	78.65
TraesCS4B01G307700.1	Wheat	mitochondrion	80.68	78.3
KXG40202	Sorghum	cytosol	54.2	74.45
HORVU4Hr1G078820.3	Barley	plastid	81.22	71.95
Bra021836.1-P	Field mustard	cytosol	56.89	71.14
HORVU1Hr1G038680.8	Barley	mitochondrion	82.65	69.06
TraesCS4D01G305900.1	Wheat	golgi	80.86	68.69
Bra001524.1-P	Field mustard	mitochondrion	66.73	65.21
TraesCS4B01G266200.1	Wheat	cytosol	36.31	48.92
GSMUA_Achr10P...	Banana	cytosol	11.09	44.93
Bra028922.1-P	Field mustard	plastid	45.44	42.98
Bra001507.1-P	Field mustard	plastid	43.11	40.85
Bra000498.1-P	Field mustard	mitochondrion	38.64	40.37
Bra011919.1-P	Field mustard	plastid	43.29	39.8
Bra011985.1-P	Field mustard	plastid	40.79	38.97
Bra034383.1-P	Field mustard	plastid	40.25	38.46
Bra012462.1-P	Field mustard	plastid	40.25	37.07
Bra030858.1-P	Field mustard	cytosol	43.65	35.41
Bra023694.1-P	Field mustard	plastid	36.14	34.95
HORVU4Hr1G071510.2	Barley	cytosol	39.18	30.76
Bra027431.1-P	Field mustard	cytosol	26.3	28.32

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	EnsemblPlantsGene:Bra005514	EnsemblPlants:Bra005514.1
EnsemblPlants:Bra005514.1-P	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4CMS6	PFAM:PF00118	PRINTS:PR00298
ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF85	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	UniParc:UPI000254740D	SEG:seg	:	:	:

Description

AT2G33210 (E=3e-154) HSP60-2 | HSP60-2 (HEAT SHOCK PROTEIN 60-2); ATP binding

Coordinates

chrA05:+:5922583..5925946

Molecular Weight (calculated)

59199.7 Da

IEP (calculated)

5.393

GRAVY (calculated)

-0.052

Length

559 amino acids

Sequence
(BLAST)

001: MYRLVSSIAS KARVARNGTT QIGSRLSSTR NYAAKDIKFG VEGRALMLRG VEELADAVQV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRVKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLKSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMESV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNQK NQKCELEDPL ILIHEKKISN LNSIVKVLEL ALKKQRPLLI VAEDLDSEAL AVLILNKLRA
301: GIKVITEELG MNLEKVDLSM FGNCKKITVS KDDTVFLDGA GDKKSISERC EQIRSMVEAS ESDYDKEKLQ ERLAKLSGGV AVLKIGGASE SEVGEKKDRV
401: TDALNATKAA VEEGIVPGGG VALLYASKEL EKLSTANFDQ KIGVQIIQNA LKTPVYTIAS NAGVEGAVVV GKLLESDDPD LGYDAAKGEY VDMVKSGIID
501: PVKVIRTALV DAASVASLLT TTEAVVTDIP TKEDASPAMG GGGGMGGMGG MGGMGGMGF

Best Arabidopsis Sequence Match ( AT2G33210.2 )
(BLAST)

001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKAPGFGEN RKANLHDLAA LTGAQVITEE LGMNLDNIDL SMFGNCKKVT VSKDDTVVLD GAGDKQAIGE RCEQIRSMVE ASTSDYDKEK LQERLAKLSG
401: GVAVLKIGGA SETEVSEKKD RVTDALNATK AAVEEGIVPG GGVALLYASK ELEKLSTANF DQKIGVQIIQ NALKTPVYTI ASNAGVEGAV VVGKLLEQDN
501: PDLGYDAAKG EYVDMIKAGI IDPLKVIRTA LVDAASVSSL LTTTEAVVTE IPTKEVASPG MGGGGMGGMG GMGGMGGMGF

Arabidopsis Description

HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.