Factsheet for Bra028922.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11918	Canola	plastid	98.65	97.98
CDY36809	Canola	plastid	98.98	96.38
AT5G56500.2	Thale cress	plastid	97.29	96.31
PGSC0003DMT400061700	Potato	extracellular	86.63	85.48
Solyc01g028810.2.1	Tomato	plastid	86.63	85.48
Bra001507.1-P	Field mustard	plastid	84.77	84.92
KRH43861	Soybean	plastid	84.94	84.8
KRH13605	Soybean	nucleus	84.77	84.77
TraesCS6B01G012000.1	Wheat	cytosol	58.88	84.67
HORVU4Hr1G076680.1	Barley	cytosol	28.26	84.34
VIT_06s0004g00240.t01	Wine grape	plastid	86.46	84.05
Zm00001d035937_P001	Maize	plastid	81.9	83.59
EER89076	Sorghum	plastid	81.56	83.25
HORVU5Hr1G074160.1	Barley	cytosol	27.41	83.08
Bra011919.1-P	Field mustard	plastid	85.28	82.89
HORVU2Hr1G107410.2	Barley	cytosol	27.92	82.5
HORVU7Hr1G006490.2	Barley	cytosol	76.65	81.77
Os06t0114000-02	Rice	plastid	82.74	81.36
TraesCS4A01G452700.2	Wheat	plastid	80.2	81.16
Zm00001d045544_P002	Maize	plastid	82.06	80.83
TraesCS6A01G006400.1	Wheat	golgi	81.73	80.77
GSMUA_Achr3P27620_001	Banana	plastid	83.59	80.72
GSMUA_Achr9P23240_001	Banana	plastid	83.59	80.72
TraesCS6D01G009100.1	Wheat	golgi	81.39	80.43
Os02t0102900-01	Rice	plastid	81.39	80.43
TraesCS6B01G011800.1	Wheat	plastid	80.2	79.93
KXG29249	Sorghum	plastid	81.39	79.64
TraesCS6B01G012100.3	Wheat	plastid	80.71	79.5
TraesCS7A01G036200.2	Wheat	golgi	81.9	78.06
Zm00001d054089_P002	Maize	plastid	80.37	76.99
TraesCS7D01G032800.1	Wheat	cytosol	81.9	76.95
TraesCS6B01G039300.2	Wheat	plastid	75.3	74.41
TraesCS6A01G028100.1	Wheat	plastid	75.13	74.25
TraesCS6D01G031400.1	Wheat	plastid	74.96	74.08
HORVU6Hr1G005220.3	Barley	plastid	74.62	73.75
Bra030858.1-P	Field mustard	cytosol	85.45	73.29
Zm00001d016540_P001	Maize	cytosol	12.86	73.08
GSMUA_Achr11P...	Banana	plastid	83.76	71.12
Zm00001d053279_P001	Maize	mitochondrion	18.44	69.43
HORVU4Hr1G066820.2	Barley	cytosol	27.41	68.94
HORVU6Hr1G000180.2	Barley	plastid	75.3	68.36
Zm00001d046709_P001	Maize	mitochondrion	18.1	68.15
Zm00001d037526_P001	Maize	plastid	18.78	62.71
Bra012462.1-P	Field mustard	plastid	61.93	60.3
Bra027431.1-P	Field mustard	cytosol	50.08	57.03
Bra000498.1-P	Field mustard	mitochondrion	47.55	52.52
Bra034383.1-P	Field mustard	plastid	49.58	50.09
Bra011985.1-P	Field mustard	plastid	49.07	49.57
Bra001934.1-P	Field mustard	mitochondrion	45.18	46.27
Bra005514.1-P	Field mustard	mitochondrion	42.98	45.44
Bra022931.1-P	Field mustard	mitochondrion	42.3	44.88
Bra023694.1-P	Field mustard	plastid	43.49	44.46
Bra001524.1-P	Field mustard	mitochondrion	41.46	42.83
Bra021836.1-P	Field mustard	cytosol	27.24	36.02
Os02t0103100-01	Rice	plasma membrane, vacuole	0.34	1.37

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
EnsemblPlantsGene:Bra028922	EnsemblPlants:Bra028922.1	EnsemblPlants:Bra028922.1-P	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829	GO:GO:0006457
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016020
GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
UniProt:M4EJF6	HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353
PANTHER:PTHR11353:SF164	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348
UniParc:UPI000253FD8B	SEG:seg	:	:	:	:

Description

AT5G56500 (E=1e-301) | ATP binding / protein binding

Coordinates

chrA03:-:5427506..5430263

Molecular Weight (calculated)

62701.4 Da

IEP (calculated)

5.417

GRAVY (calculated)

-0.092

Length

591 amino acids

Sequence
(BLAST)

001: MASTFSATSS IAPPSSRLSS LVSSNSFGKS LTFAQRKARF PKIYAAKQLH FNKDGTAIRK LQAGVNKLAD LVGVTLGPKG RNVVLESKYG SPRIVNDGVT
101: VAREVELEDP VENIGAKLVR QAASKTNDLA GDGTTTSVVL AQGLITEGVK VVAAGANPVL ITRGIEKTTK ALVAELKKMS KEVEDSELAD VAAVSAGNNY
201: EVGNMIAEAM AKVGRKGVVT LEEGKSAENS LYVVEGMQFD RGYISPYFVT DSEKMCAEYE NCKMFLVDKK ITNARDIISI LEDAIKGGYP LLIIAEDIEQ
301: EALATLVVNK LRGTIKVAAL KAPGFGERKS QYLDDIAALT GATVIREEVG LQLEKVGPEV LGNAGKVVLT KDTTTIVGDG STEEVVKKRV EQIKNLIEAA
401: EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKETLAND EEKVGADIVK KALSYPLKLI
501: AKNAGVNGSV VSEKVLSSDD PKHGYNAATG KYEDLMAAGI IDPTKVVRCC LEHASSVAKT FLMSDCVVVE INEPESAAPA GNPMGNSGYG F

Best Arabidopsis Sequence Match ( AT5G56500.1 )
(BLAST)

001: MASTFSATSS MGSSLAPPSN RLSSFVSISS SSFGRTQSIA QRKARFPKIY AAKQLHFNKD GTAIKKLQAG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
101: VNDGVTVARE VELEDPVENI GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL IAEGVKVVAA GANPVLITRG IEKTTKALVA ELKKMSKEVE DSELADVAAV
201: SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV EGMQFDRGYI SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII
301: AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV IREEVGLQLE KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK
401: NLIEAAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK ETLANDEEKV GADIVKKALS
501: YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED LMAAGIIDPT KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF

Arabidopsis Description

CPN60B3Chaperonin 60 subunit beta 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:C0Z361]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.