Factsheet for HORVU4Hr1G066820.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G074160.1	Barley	cytosol	65.96	79.49
HORVU4Hr1G076680.1	Barley	cytosol	66.81	79.29
HORVU2Hr1G107410.2	Barley	cytosol	65.53	77.0
CDY32775	Canola	cytosol	19.57	54.12
HORVU2Hr1G109400.1	Barley	cytosol	17.02	43.48
CDX72433	Canola	endoplasmic reticulum	46.38	34.49
CDY10302	Canola	extracellular	9.36	33.85
HORVU6Hr1G005220.3	Barley	plastid	82.13	32.27
HORVU7Hr1G006490.2	Barley	cytosol	69.79	29.6
Os02t0102900-01	Rice	plastid	74.47	29.26
KXG29249	Sorghum	plastid	74.47	28.97
CDX75715	Canola	cytosol	68.09	28.42
Zm00001d054089_P002	Maize	plastid	74.04	28.2
CDX82537	Canola	plastid	69.36	27.77
AT3G13470.1	Thale cress	plastid	70.21	27.68
Bra001507.1-P	Field mustard	plastid	69.36	27.63
Bra028922.1-P	Field mustard	plastid	68.94	27.41
AT5G56500.2	Thale cress	plastid	69.36	27.3
GSMUA_Achr3P27620_001	Banana	plastid	71.06	27.29
KRH13605	Soybean	nucleus	68.51	27.24
KRH43861	Soybean	plastid	68.51	27.2
AT1G55490.3	Thale cress	plastid	69.36	27.17
CDY08245	Canola	plastid	69.36	27.17
CDX75713	Canola	plastid	68.51	27.15
GSMUA_Achr9P23240_001	Banana	plastid	70.64	27.12
CDY32855	Canola	plastid	68.51	27.1
CDY11918	Canola	plastid	68.09	26.89
Bra011919.1-P	Field mustard	plastid	69.36	26.81
VIT_09s0002g03930.t01	Wine grape	plastid	69.36	26.77
CDY36809	Canola	plastid	68.94	26.69
HORVU2Hr1G011340.1	Barley	cytosol	18.72	26.67
VIT_06s0004g00240.t01	Wine grape	plastid	68.94	26.64
Solyc01g028810.2.1	Tomato	plastid	66.81	26.21
PGSC0003DMT400061700	Potato	extracellular	66.81	26.21
CDY26100	Canola	plastid	69.36	25.96
Solyc03g120850.2.1	Tomato	plastid	65.53	25.45
PGSC0003DMT400006501	Potato	plastid	65.53	25.45
Bra030858.1-P	Field mustard	cytosol	68.94	23.51
CDY02438	Canola	cytosol	69.36	23.39
CDX86994	Canola	mitochondrion, plastid	68.94	23.08
HORVU6Hr1G000180.2	Barley	plastid	62.55	22.58
CDY56074	Canola	plastid	44.68	22.11
CDY23605	Canola	cytosol	39.57	21.43
CDY10557	Canola	endoplasmic reticulum, plastid	68.94	19.54
HORVU2Hr1G077410.18	Barley	plastid	48.09	19.02
Bra027431.1-P	Field mustard	cytosol	40.0	18.11
CDY43988	Canola	cytosol	39.57	18.09
HORVU5Hr1G125130.1	Barley	plastid	43.83	17.55
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	43.4	16.35
HORVU0Hr1G038830.17	Barley	plastid	37.02	14.75
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	36.17	14.63
HORVU4Hr1G078820.3	Barley	plastid	37.45	13.95
HORVU1Hr1G038680.8	Barley	mitochondrion	37.87	13.3
CDX85007	Canola	cytosol, plastid	56.6	13.25
HORVU4Hr1G071510.2	Barley	cytosol	20.85	6.88
CDY40825	Canola	endoplasmic reticulum, vacuole	2.98	3.29
Os02t0103100-01	Rice	plasma membrane, vacuole	0.43	0.68

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A287PFB1	InterPro:Chaprnin_Cpn60
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987
GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU4Hr1G066820	EnsemblPlants:HORVU4Hr1G066820.2	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF102
SUPFAM:SSF48592	InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B467285	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:555424533..555426272

Molecular Weight (calculated)

26107.6 Da

IEP (calculated)

8.374

GRAVY (calculated)

-0.195

Length

235 amino acids

Sequence
(BLAST)

001: YLLQMTPQCW GPQSPDSQKQ GCCMMEAAYL GRYATRRRNN FFQATEHEYE REKLKERIAK LYDGVAIIQV GAQTETELKE KKLRVEDALN ATKAAVEEGI
101: IVGGRCTLVR LASKVDAIKQ TLENDEQRVG AEIVRKSLSY PLKLIAENAG VNGSVVIEKV LAIDNSRYGY NAATGKYEDL MAAGIIDQTK VVRCCLEHAA
201: SVAKTFITSD AVVVDIRVPK CTLVVNLMCG SRIWR

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.