Factsheet for HORVU0Hr1G038830.17

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G366800.1	Wheat	plastid	97.8	97.63
TraesCS5B01G368900.1	Wheat	plastid	97.46	97.46
TraesCS5D01G376000.1	Wheat	plastid	96.78	96.78
Os09t0563300-02	Rice	plastid	89.32	90.24
EER96340	Sorghum	plastid	88.47	89.23
VIT_01s0011g01680.t01	Wine grape	plastid	61.53	62.26
PGSC0003DMT400027020	Potato	cytosol	55.59	61.19
KRH50415	Soybean	plastid	59.66	59.97
Solyc02g068730.2.1	Tomato	plastid	58.81	59.52
Bra023694.1-P	Field mustard	plastid	57.97	59.17
CDY47184	Canola	plastid	57.97	59.17
AT5G18820.1	Thale cress	plastid	57.63	59.13
CDY02601	Canola	plastid	57.63	58.82
KRG89369	Soybean	plastid	58.64	58.74
HORVU5Hr1G125130.1	Barley	plastid	56.44	56.73
HORVU2Hr1G011340.1	Barley	cytosol	14.58	52.12
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	54.58	51.6
HORVU2Hr1G109400.1	Barley	cytosol	7.63	48.91
HORVU4Hr1G076680.1	Barley	cytosol	14.75	43.94
Zm00001d005373_P001	Maize	plastid	88.64	43.55
HORVU2Hr1G107410.2	Barley	cytosol	14.75	43.5
HORVU5Hr1G074160.1	Barley	cytosol	13.9	42.05
HORVU7Hr1G006490.2	Barley	cytosol	37.97	40.43
HORVU6Hr1G005220.3	Barley	plastid	39.32	38.8
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	36.95	37.52
HORVU4Hr1G066820.2	Barley	cytosol	14.75	37.02
HORVU2Hr1G077410.18	Barley	plastid	35.59	35.35
HORVU4Hr1G078820.3	Barley	plastid	37.63	35.18
HORVU6Hr1G000180.2	Barley	plastid	37.97	34.41
HORVU1Hr1G038680.8	Barley	mitochondrion	37.8	33.33
GSMUA_Achr10P...	Banana	cytosol	65.42	31.48
HORVU4Hr1G071510.2	Barley	cytosol	24.58	20.37

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
EnsemblPlantsGene:HORVU0Hr1G038830	EnsemblPlants:HORVU0Hr1G038830.17	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M0VE95
PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF121	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI000295E6A0	SEG:seg	:

Description

No Description!

Coordinates

chrchrUn:-:247573555..247578570

Molecular Weight (calculated)

62975.6 Da

IEP (calculated)

5.959

GRAVY (calculated)

0.094

Length

590 amino acids

Sequence
(BLAST)

001: MSLTTASFAA PPCSSSSSCP VLPRWPCRLH RPARVCRRLA VRADVKVIST GDACRRGLAA GIHKLADAVS VTLGPKGRNV VIDQDDVPKV INDGVTIAKA
101: IELPNSLEHA GAMLLQEIAA KTNSSVGDGT TTAIILAREI ISLGLLAVAN GANPVALRKG IDKAVHELLG ILKTKSIPVS TKEDIKAVAS ISAGNDEYVG
201: DLIADALEKI GPDGIIKIES SSSIYTSVEV QEGMKIDKGY TSPHFITNPD KAIVEFENAR VLLTDQRVNE IQDILPLLEK TTQLSVPLLI IAEDISHSVY
301: STLVLNKLNG LLNVAVVKCP GLGDEKKAIL QDIAIMTGAD FFVSDLGWGL QAITSDQLGM AQKITITSES TTIIAHPSMR PEIEARIMQL KKDLEETTSA
401: YLKERFSARI AKLSRGVAVI KVGAATEAEL EDRKLRVEDA KNATFAAISE GITPGGGVTY VELSKHIPSI MDLVDDPEEK IGVNIVGKAL LVPAMTIARN
501: AGADGSAVVE KILESEWRVG YNAMTDKFED LVEAGVVDPC RVARCVLQNS ASIAGLILMT QAMMFDKIKK KKSPIPEIPG LPPLQINQNA

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.