Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47184 | Canola | plastid | 93.57 | 93.08 |
| Bra023694.1-P | Field mustard | plastid | 93.22 | 92.73 |
| CDY02601 | Canola | plastid | 92.87 | 92.39 |
| VIT_01s0011g01680.t01 | Wine grape | plastid | 73.39 | 72.38 |
| KRG89369 | Soybean | plastid | 71.83 | 70.12 |
| KRH50415 | Soybean | plastid | 71.48 | 70.02 |
| PGSC0003DMT400027020 | Potato | cytosol | 64.87 | 69.59 |
| Solyc02g068730.2.1 | Tomato | plastid | 69.04 | 68.1 |
| Os09t0563300-02 | Rice | plastid | 59.48 | 58.56 |
| TraesCS5A01G366800.1 | Wheat | plastid | 59.3 | 57.7 |
| AT2G28000.1 | Thale cress | plastid | 58.78 | 57.68 |
| HORVU0Hr1G038830.17 | Barley | plastid | 59.13 | 57.63 |
| EER96340 | Sorghum | plastid | 58.61 | 57.61 |
| TraesCS5B01G368900.1 | Wheat | plastid | 58.78 | 57.29 |
| TraesCS5D01G376000.1 | Wheat | plastid | 58.43 | 56.95 |
| AT5G56500.2 | Thale cress | plastid | 44.35 | 42.71 |
| AT1G55490.3 | Thale cress | plastid | 44.35 | 42.5 |
| AT3G13470.1 | Thale cress | plastid | 43.83 | 42.28 |
| AT3G23990.1 | Thale cress | mitochondrion | 37.91 | 37.78 |
| AT2G33210.1 | Thale cress | mitochondrion | 37.39 | 36.75 |
| AT3G13860.1 | Thale cress | mitochondrion | 35.3 | 35.49 |
| AT1G26230.1 | Thale cress | plastid | 37.57 | 35.35 |
| GSMUA_Achr10P... | Banana | cytosol | 65.22 | 30.59 |
| Zm00001d005373_P001 | Maize | plastid | 59.13 | 28.31 |
Protein Annotations
| MapMan:1.1.8.1.6.2.1 | Gene3D:1.10.560.10 | MapMan:1.2.1.2.1.1 | MapMan:19.1.7.1 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 |
| EntrezGene:832000 | EMBL:AC068655 | ProteinID:AED92616.1 | EMBL:AK221565 | ArrayExpress:AT5G18820 | EnsemblPlantsGene:AT5G18820 |
| RefSeq:AT5G18820 | TAIR:AT5G18820 | RefSeq:AT5G18820-TAIR-G | EnsemblPlants:AT5G18820.1 | TAIR:AT5G18820.1 | InterPro:Chaprnin_Cpn60 |
| InterPro:Cpn60/TCP-1 | Symbol:EMB3007 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005829 | GO:GO:0006458 | GO:GO:0007005 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042026 | GO:GO:0044183 | GO:GO:0051082 | GO:GO:0061077 |
| InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 | InterPro:IPR027410 | InterPro:IPR027413 | RefSeq:NP_197383.1 |
| PFAM:PF00118 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 |
| PRINTS:PR00298 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF172 | UniProt:Q56XV8 | SUPFAM:SSF48592 | SUPFAM:SSF52029 |
| SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02348 | UniParc:UPI00001624E2 | SEG:seg | : |
Description
CPN60A2Chaperonin 60 subunit alpha 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56XV8]
Coordinates
chr5:+:6271386..6274599
Molecular Weight (calculated)
61196.4 Da
IEP (calculated)
8.149
GRAVY (calculated)
-0.004
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAVSPSSFS PTTISPRRSG QRNEPRKFSV VRAGAKRILY GKDSREKLQA GIDKLADAVS ITLGPRGRNV VLAEKDTIKV INDGVTIAKS IELPDTIENA
101: GATLIQEVAI KMNESAGDGT TTAIILAREM IKAGSLAIAF GANAVSVKNG MNKTVKELVR VLQMKSIPVQ GKNDIKAVAS ISAGNDEFVG NLIAETVEKI
201: GPDGVISIES SSTSETSVIV EEGMKFDKGY MSPHFITNQE KSTVEFDKAK ILVTDQKITS AKELVPLLEK TSQLSVPLLI IAEDISAEVL EILVVNKKQG
301: LINVAVVKCP GMLDGKKALL QDIALMTGAD YLSGDLGMSL MGATSDQLGV SRRVVITANS TTIVADASTK PEIQARIAQM KKDLAETDNS YLSKKIAERI
401: AKLTGGVAVI KVGGHTETEL EDRKLRIEDA KNATFAAMRE GIVPGGGATY IHLLDEIPRI KKNLMEDSYE QIGADIVAMA LTAPAMAIAT NAGVDGSVVV
501: QKTRELEWRS GYNAMSGKYE DLLNAGIADP CRVSRFALQN AVSVAGIILT TQAVLVEKIK QPKPAVPQVP GIPTS
101: GATLIQEVAI KMNESAGDGT TTAIILAREM IKAGSLAIAF GANAVSVKNG MNKTVKELVR VLQMKSIPVQ GKNDIKAVAS ISAGNDEFVG NLIAETVEKI
201: GPDGVISIES SSTSETSVIV EEGMKFDKGY MSPHFITNQE KSTVEFDKAK ILVTDQKITS AKELVPLLEK TSQLSVPLLI IAEDISAEVL EILVVNKKQG
301: LINVAVVKCP GMLDGKKALL QDIALMTGAD YLSGDLGMSL MGATSDQLGV SRRVVITANS TTIVADASTK PEIQARIAQM KKDLAETDNS YLSKKIAERI
401: AKLTGGVAVI KVGGHTETEL EDRKLRIEDA KNATFAAMRE GIVPGGGATY IHLLDEIPRI KKNLMEDSYE QIGADIVAMA LTAPAMAIAT NAGVDGSVVV
501: QKTRELEWRS GYNAMSGKYE DLLNAGIADP CRVSRFALQN AVSVAGIILT TQAVLVEKIK QPKPAVPQVP GIPTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.