Factsheet for AT2G28000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68896	Canola	cytosol	54.61	94.96
Bra011985.1-P	Field mustard	plastid	93.69	93.85
CDX83280	Canola	plastid	93.17	93.81
CDY31190	Canola	plastid	93.17	93.17
Bra034383.1-P	Field mustard	plastid	92.83	92.99
Bra000498.1-P	Field mustard	mitochondrion	84.81	92.9
CDY30514	Canola	plastid	92.66	92.82
CDY04527	Canola	plastid	93.69	92.11
CDX71396	Canola	plastid	79.35	87.9
CDX77147	Canola	plastid	92.49	87.14
KRH25068	Soybean	nucleus	85.32	85.62
Solyc11g069790.1.1	Tomato	plastid	83.79	83.5
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	83.28	82.99
VIT_06s0061g00270.t01	Wine grape	plastid	82.94	82.94
Os12t0277500-01	Rice	plastid	81.23	82.35
EES19317	Sorghum	plastid	80.55	81.8
TraesCSU01G009200.1	Wheat	mitochondrion, plastid	80.38	81.49
TraesCS2D01G049500.1	Wheat	golgi, plastid	80.38	81.49
Zm00001d000399_P001	Maize	plastid	81.06	81.34
GSMUA_Achr11P...	Banana	plastid	81.23	81.23
Os03t0859600-01	Rice	plastid	43.17	81.09
GSMUA_AchrUn_...	Banana	plastid	78.84	80.07
EER90466	Sorghum	plastid	77.65	78.45
KRH30612	Soybean	endoplasmic reticulum	79.35	78.41
TraesCS4A01G315500.2	Wheat	plastid	77.3	77.3
Solyc06g075010.2.1	Tomato	plastid	77.65	77.25
TraesCS5D01G550700.1	Wheat	plastid	77.47	77.21
HORVU2Hr1G109400.1	Barley	cytosol	12.12	77.17
HORVU5Hr1G125130.1	Barley	plastid	77.3	77.17
PGSC0003DMT400031301	Potato	plastid	77.47	77.08
Zm00001d034919_P001	Maize	plastid	76.79	77.05
TraesCS5B01G563900.2	Wheat	plastid	77.3	77.04
HORVU2Hr1G011340.1	Barley	cytosol	21.33	75.76
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	80.55	75.64
Os03t0859700-00	Rice	extracellular, plastid	21.67	68.65
Zm00001d051252_P001	Maize	cytosol	23.21	66.34
AT5G18820.1	Thale cress	plastid	57.68	58.78
AT5G56500.2	Thale cress	plastid	48.81	47.91
AT1G55490.3	Thale cress	plastid	47.95	46.83
AT3G13470.1	Thale cress	plastid	47.1	46.31
AT3G23990.1	Thale cress	mitochondrion	41.47	42.11
AT2G33210.1	Thale cress	mitochondrion	41.98	42.05
AT3G13860.1	Thale cress	mitochondrion	39.42	40.38
AT1G26230.1	Thale cress	plastid	41.81	40.1

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
EntrezGene:817344	UniProt:A0A178VZW6	ProteinID:AAA92061.1	ProteinID:AAD21502.1	ProteinID:AEC08068.1	EMBL:AK222126
ArrayExpress:AT2G28000	EnsemblPlantsGene:AT2G28000	RefSeq:AT2G28000	TAIR:AT2G28000	RefSeq:AT2G28000-TAIR-G	EnsemblPlants:AT2G28000.1
TAIR:AT2G28000.1	EMBL:AY086555	Unigene:At.24154	EMBL:BT002441	EMBL:BT008784	Symbol:CPN60A
InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829	GO:GO:0005840
GO:GO:0006457	GO:GO:0006458	GO:GO:0007005	GO:GO:0007275	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0022626
GO:GO:0042026	GO:GO:0044183	GO:GO:0048046	GO:GO:0051082	GO:GO:0061077	InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	EMBL:M35597	HAMAP:MF_00600
RefSeq:NP_180367.1	ProteinID:OAP10795.1	UniProt:P21238	PFAM:PF00118	PO:PO:0000005	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001170	PO:PO:0001185	PO:PO:0004507	PO:PO:0006339	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353
PANTHER:PTHR11353:SF175	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348
UniParc:UPI000000BD81	SEG:seg	:	:	:	:

Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]

Coordinates

chr2:+:11926446..11929488

Molecular Weight (calculated)

62075.6 Da

IEP (calculated)

4.815

GRAVY (calculated)

0.002

Length

586 amino acids

Sequence
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.