Factsheet for Zm00001d051252_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68896	Canola	cytosol	62.44	37.98
Zm00001d016540_P001	Maize	cytosol	18.54	36.54
Zm00001d000399_P001	Maize	plastid	78.05	27.4
EES19317	Sorghum	plastid	75.61	26.86
Os12t0277500-01	Rice	plastid	74.15	26.3
Zm00001d053279_P001	Maize	mitochondrion	20.0	26.11
TraesCSU01G009200.1	Wheat	mitochondrion, plastid	71.22	25.26
TraesCS2D01G049500.1	Wheat	golgi, plastid	71.22	25.26
Bra000498.1-P	Field mustard	mitochondrion	65.37	25.05
Zm00001d046709_P001	Maize	mitochondrion	19.02	24.84
GSMUA_Achr11P...	Banana	plastid	68.78	24.06
GSMUA_AchrUn_...	Banana	plastid	67.32	23.92
VIT_06s0061g00270.t01	Wine grape	plastid	67.32	23.55
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	71.22	23.4
CDX71396	Canola	plastid	60.0	23.25
AT2G28000.1	Thale cress	plastid	66.34	23.21
Zm00001d037526_P001	Maize	plastid	20.0	23.16
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	66.34	23.13
Solyc11g069790.1.1	Tomato	plastid	66.34	23.13
Bra034383.1-P	Field mustard	plastid	65.37	22.91
CDX83280	Canola	plastid	64.88	22.85
Bra011985.1-P	Field mustard	plastid	64.88	22.73
CDY30514	Canola	plastid	64.88	22.73
CDY31190	Canola	plastid	64.88	22.7
Zm00001d034919_P001	Maize	plastid	64.39	22.6
KRH25068	Soybean	nucleus	63.9	22.43
CDY04527	Canola	plastid	64.88	22.32
KRH30612	Soybean	endoplasmic reticulum	62.44	21.59
CDX77147	Canola	plastid	65.37	21.54
PGSC0003DMT400031301	Potato	plastid	59.02	20.54
Solyc06g075010.2.1	Tomato	plastid	58.54	20.37
Zm00001d017567_P001	Maize	cytosol	16.1	20.0
Zm00001d035937_P001	Maize	plastid	38.05	13.47
Zm00001d045544_P002	Maize	plastid	37.56	12.83
Zm00001d014090_P002	Maize	mitochondrion	35.61	12.65
Zm00001d032789_P001	Maize	plastid	35.12	12.5
Zm00001d054089_P002	Maize	plastid	37.07	12.32
Zm00001d038857_P001	Maize	mitochondrion	33.17	11.72
Zm00001d028409_P001	Maize	plastid	33.17	11.56
Zm00001d013912_P001	Maize	mitochondrion	6.34	10.16
Zm00001d031503_P001	Maize	endoplasmic reticulum	5.85	9.68
HORVU2Hr1G109400.1	Barley	cytosol	3.9	8.7
Zm00001d005373_P001	Maize	plastid	49.76	8.49
HORVU2Hr1G011340.1	Barley	cytosol	6.83	8.48

Protein Annotations

Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A1D6Q5V6	ProteinID:AQK53906.1	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027413
PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF175	SUPFAM:SSF48592
SUPFAM:SSF52029	UniParc:UPI0008456B9D	EnsemblPlantsGene:Zm00001d051252	EnsemblPlants:Zm00001d051252_P001	EnsemblPlants:Zm00001d051252_T001	SEG:seg

Description

Chaperonin 60 subunit alpha 2 chloroplastic

Coordinates

chr4:-:150768526..150771360

Molecular Weight (calculated)

21497.7 Da

IEP (calculated)

4.814

GRAVY (calculated)

0.014

Length

205 amino acids

Sequence
(BLAST)

001: MVLVCTYINK DVSVSFSLYH VSSLSGAGFL AKDLGLLVEN DTEEQLGTAR KVTIHQTTTT LIVDAASKDE IQARIAQLKK ELAETDSVYD TEKLAKRIAK
101: LAGGVAIIKV GAATETELED RQLRIEDAKN ATFAAIEEGI IPGGGAAYVH LSTVVPKIKE AIEDPDERLG VDIIQKVGAC AWTAASGGVG VGGGGRCLGD
201: GRGQT

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.