CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011985.1-P	Field mustard	plastid	97.82	99.66
CDY68896	Canola	cytosol	55.7	98.52
CDX83280	Canola	plastid	94.97	97.25
CDY30514	Canola	plastid	95.3	97.09
CDY31190	Canola	plastid	95.3	96.93
AT2G28000.1	Thale cress	plastid	92.11	93.69
CDX71396	Canola	plastid	82.21	92.63
CDX77147	Canola	plastid	95.13	91.16
KRH25068	Soybean	nucleus	84.73	86.47
Solyc11g069790.1.1	Tomato	plastid	82.89	84.01
VIT_06s0061g00270.t01	Wine grape	plastid	82.05	83.45
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	82.05	83.16
Os12t0277500-01	Rice	plastid	79.87	82.35
GSMUA_Achr11P...	Banana	plastid	80.7	82.08
Os03t0859600-01	Rice	plastid	42.95	82.05
EES19317	Sorghum	plastid	79.19	81.8
Zm00001d000399_P001	Maize	plastid	80.03	81.68
TraesCSU01G009200.1	Wheat	mitochondrion, plastid	78.86	81.31
TraesCS2D01G049500.1	Wheat	golgi, plastid	78.86	81.31
GSMUA_AchrUn_...	Banana	plastid	78.69	81.28
EER90466	Sorghum	plastid	78.36	80.52
KRH30612	Soybean	endoplasmic reticulum	78.86	79.26
Zm00001d034919_P001	Maize	plastid	77.52	79.11
TraesCS4A01G315500.2	Wheat	plastid	77.35	78.67
TraesCS5D01G550700.1	Wheat	plastid	77.52	78.57
HORVU5Hr1G125130.1	Barley	plastid	77.35	78.53
CDY31193	Canola	plastid	31.21	78.48
TraesCS5B01G563900.2	Wheat	plastid	77.35	78.4
Solyc06g075010.2.1	Tomato	plastid	76.51	77.42
PGSC0003DMT400031301	Potato	plastid	76.34	77.25
HORVU2Hr1G109400.1	Barley	cytosol	11.91	77.17
HORVU2Hr1G011340.1	Barley	cytosol	21.31	76.97
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	79.03	75.48
Os03t0859700-00	Rice	extracellular, plastid	22.48	72.43
Zm00001d051252_P001	Maize	cytosol	22.32	64.88
CDY47184	Canola	plastid	57.89	59.69
CDY02601	Canola	plastid	57.38	59.17
CDY11918	Canola	plastid	48.83	48.91
CDY32855	Canola	plastid	48.66	48.82
CDX75715	Canola	cytosol	45.3	47.96
CDY08245	Canola	plastid	48.15	47.83
CDY36809	Canola	plastid	48.66	47.78
CDX75713	Canola	plastid	47.32	47.55
CDX82537	Canola	plastid	46.81	47.53
CDY26100	Canola	plastid	47.99	45.54
CDX72433	Canola	endoplasmic reticulum	22.99	43.35
CDX94835	Canola	mitochondrion	41.44	42.81
CDX93002	Canola	mitochondrion	39.09	42.36
CDY19471	Canola	mitochondrion	41.95	42.16
CDY59050	Canola	cytosol	23.83	42.01
CDY20555	Canola	plastid	42.62	41.85
CDX79518	Canola	cytosol	14.09	41.58
CDY66193	Canola	plastid	42.28	41.52
CDY17152	Canola	mitochondrion	39.77	41.29
CDY72107	Canola	mitochondrion	21.14	41.04
CDX84697	Canola	mitochondrion	38.76	41.03
CDY23605	Canola	cytosol	29.7	40.78
CDY02438	Canola	cytosol	47.65	40.75
CDX82514	Canola	mitochondrion	38.59	40.21
CDX75733	Canola	mitochondrion	38.42	40.03
CDY56074	Canola	plastid	29.19	36.63
CDY59049	Canola	mitochondrion	13.26	36.24
CDY43988	Canola	cytosol	30.54	35.41
CDY10557	Canola	endoplasmic reticulum, plastid	47.48	34.14
CDY66712	Canola	mitochondrion	33.89	33.5
CDY32775	Canola	cytosol	4.7	32.94
CDY40825	Canola	endoplasmic reticulum, vacuole	11.58	32.39
CDY37741	Canola	mitochondrion	31.71	30.93
CDY10302	Canola	extracellular	3.02	27.69
CDX86994	Canola	mitochondrion, plastid	31.54	26.78
CDY56079	Canola	plastid	4.7	20.9
CDX85007	Canola	cytosol, plastid	26.85	15.94

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
GO:A0A078EU92	EnsemblPlants:CDY04527	ProteinID:CDY04527	ProteinID:CDY04527.1	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00118698001
InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	PFAM:PF00118
PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF175	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI0004EDF9A2	SEG:seg	:

Description

BnaA07g13530D

Coordinates

chrLK031955:+:491977..494477

Molecular Weight (calculated)

63211.1 Da

IEP (calculated)

4.785

GRAVY (calculated)

0.041

Length

596 amino acids

Sequence
(BLAST)

001: MATANALSSP SVLCSSRQFS FLKCFFGFWG KLSGGSQQKG QRVSYRKANR RFSVRANVKE IAFDQSSRAA LQAGIDKLAD AVGLTLGPRG RNVVLDEFGS
101: PKVVNDGVTI ARAIELPDAM ENAGAALIRE VASKTNDSAG DGTTTASVLA REIIKHGLLS VTSGANPVSL KRGIDKTVQA LIEELEKRSR PVKGGSDIKA
201: VATISAGNDE LIGAMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLVEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP
301: LLIIAEDVTG EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYQALDMG LLVENTTIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI
401: SQLKKELFET DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG ATLVHLSTVI PAIKETFEDA DERLGADIVQ
501: KALVAPAALI AQNAGIEGEV VVEKIMFSEW ELGYNAMTDT YENLLEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)

001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

Arabidopsis Description

CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.