CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027431.1-P	Field mustard	cytosol	98.83	97.88
CDY23605	Canola	cytosol	65.95	78.11
Zm00001d016540_P001	Maize	cytosol	13.23	65.38
CDX72433	Canola	endoplasmic reticulum	35.99	58.54
Zm00001d053279_P001	Maize	mitochondrion	17.32	56.69
TraesCS6B01G012000.1	Wheat	cytosol	45.14	56.45
Zm00001d046709_P001	Maize	mitochondrion	16.73	54.78
CDX75715	Canola	cytosol	59.53	54.35
CDX82537	Canola	plastid	61.28	53.66
AT3G13470.1	Thale cress	plastid	61.09	52.68
CDX75713	Canola	plastid	60.7	52.61
HORVU7Hr1G006490.2	Barley	cytosol	55.84	51.81
CDY08245	Canola	plastid	59.73	51.17
Solyc01g028810.2.1	Tomato	plastid	59.53	51.09
KRH43861	Soybean	plastid	58.75	51.01
EER89076	Sorghum	plastid	57.39	50.95
PGSC0003DMT400061700	Potato	extracellular	59.34	50.92
Zm00001d037526_P001	Maize	plastid	17.51	50.85
Zm00001d035937_P001	Maize	plastid	57.2	50.78
KRH13605	Soybean	nucleus	58.37	50.76
CDY32855	Canola	plastid	57.39	49.66
Zm00001d045544_P002	Maize	plastid	57.59	49.33
CDY11918	Canola	plastid	57.0	49.24
HORVU4Hr1G076680.1	Barley	cytosol	18.87	48.99
CDY26100	Canola	plastid	59.73	48.89
TraesCS6B01G011800.1	Wheat	plastid	56.23	48.74
HORVU5Hr1G074160.1	Barley	cytosol	18.48	48.72
GSMUA_Achr3P27620_001	Banana	plastid	57.98	48.69
CDY36809	Canola	plastid	57.39	48.6
GSMUA_Achr9P23240_001	Banana	plastid	57.78	48.53
TraesCS6D01G009100.1	Wheat	golgi	56.42	48.49
TraesCS6A01G006400.1	Wheat	golgi	56.42	48.49
Os02t0102900-01	Rice	plastid	56.23	48.33
Os06t0114000-02	Rice	plastid	56.42	48.25
TraesCS6B01G012100.3	Wheat	plastid	56.23	48.17
TraesCS4A01G452700.2	Wheat	plastid	54.28	47.77
HORVU2Hr1G107410.2	Barley	cytosol	18.48	47.5
KXG29249	Sorghum	plastid	55.64	47.35
TraesCS7A01G036200.2	Wheat	golgi	56.42	46.77
Zm00001d054089_P002	Maize	plastid	55.45	46.19
TraesCS7D01G032800.1	Wheat	cytosol	56.42	46.1
TraesCS6B01G039300.2	Wheat	plastid	52.53	45.15
TraesCS6A01G028100.1	Wheat	plastid	52.33	44.98
TraesCS6D01G031400.1	Wheat	plastid	52.14	44.82
HORVU6Hr1G005220.3	Barley	plastid	51.56	44.31
CDY02438	Canola	cytosol	59.73	44.05
GSMUA_Achr11P...	Banana	plastid	57.59	42.53
HORVU6Hr1G000180.2	Barley	plastid	52.72	41.63
HORVU4Hr1G066820.2	Barley	cytosol	18.09	39.57
CDY20555	Canola	plastid	44.36	37.56
CDY10557	Canola	endoplasmic reticulum, plastid	59.92	37.15
CDY66193	Canola	plastid	43.77	37.07
CDY68896	Canola	cytosol	23.74	36.2
CDY10302	Canola	extracellular	4.47	35.38
CDY56074	Canola	plastid	32.68	35.37
CDX86994	Canola	mitochondrion, plastid	45.33	33.19
CDX71396	Canola	plastid	32.1	31.19
CDX83280	Canola	plastid	35.21	31.1
CDY30514	Canola	plastid	35.21	30.94
CDY31190	Canola	plastid	35.02	30.72
CDY04527	Canola	plastid	35.41	30.54
CDY47184	Canola	plastid	34.24	30.45
CDY02601	Canola	plastid	34.05	30.28
CDY59050	Canola	cytosol	19.46	29.59
CDX77147	Canola	plastid	35.02	28.94
CDX79518	Canola	cytosol	11.28	28.71
CDX82514	Canola	mitochondrion	31.32	28.15
CDX75733	Canola	mitochondrion	31.13	27.97
CDX94835	Canola	mitochondrion	30.93	27.56
CDY17152	Canola	mitochondrion	30.74	27.53
CDX93002	Canola	mitochondrion	29.18	27.27
CDX84697	Canola	mitochondrion	29.77	27.18
CDY19471	Canola	mitochondrion	31.32	27.15
CDY32775	Canola	cytosol	4.47	27.06
CDY72107	Canola	mitochondrion	14.2	23.78
CDY40825	Canola	endoplasmic reticulum, vacuole	9.73	23.47
CDY66712	Canola	mitochondrion	26.26	22.39
CDY37741	Canola	mitochondrion	24.9	20.95
CDY31193	Canola	plastid	9.34	20.25
CDX85007	Canola	cytosol, plastid	36.19	18.53
CDY59049	Canola	mitochondrion	7.78	18.35
CDY56079	Canola	plastid	4.47	17.16
Os02t0103100-01	Rice	plasma membrane, vacuole	0.19	0.68

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.50.7.10	MapMan:35.1	GO:A0A078I4E4	UniProt:A0A078I4E4	EnsemblPlants:CDY43988
ProteinID:CDY43988	ProteinID:CDY43988.1	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00079382001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027413	PFAM:PF00118	PANTHER:PTHR11353	PANTHER:PTHR11353:SF164	SUPFAM:SSF48592	SUPFAM:SSF52029
UniParc:UPI0004EE4506	:	:	:	:	:

Description

BnaA05g25830DBnaA05g25830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4E4]

Coordinates

chrLK032576:-:24328..26826

Molecular Weight (calculated)

55585.9 Da

IEP (calculated)

4.596

GRAVY (calculated)

-0.302

Length

514 amino acids

Sequence
(BLAST)

001: MDAFERNYRS HGVNVTSEEY FEEPVENIGA KLARQAAAKT SDLAGHGVVL AQGFIDECVK VVADGVNPVL VSKGIDKTEK VLVYELDLMS KGRNAGNDPE
101: AGSMIAEAKR RVAKNDVLVI DEGKSAENNL YADYGNGCEY YMVNTERLLG EYHNCEVQVQ DSEVAAVSNP EAVRMIAEAK SKVGKNGVVV IDEGKSAENK
201: VYAVEGIQFD NGNDSEYFIT DYERMCVEYD NCKVIFYFCA QLLLVDHKIT NERELVEFME NVTRGGDPII IIAEDIEKEP LDTLVVRKSR GKWNVASVKA
301: PGSGELKSQY LDDIAIITGA TVIREEDGLT LDKAGKEVLG NAYKVVITKE MTTIVGDGTT HEAVSKRVAE IKSLIEQAER GSEKETLNER LAKLSGGVAV
401: IQVGGQTETE RIEKKLRFEE ALNGTKGSVV GGGCTLLGLA AKVDAIKDTL ENEEEKVGAD IVKKGLSNAG EGGSVVSEKL LRGSLEHAAS AAKKFLMSGI
501: KEPEAGNPMN NISG

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.