Factsheet for HORVU7Hr1G006490.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G452700.2	Wheat	plastid	91.88	87.16
Zm00001d035937_P001	Maize	plastid	90.79	86.87
EER89076	Sorghum	plastid	90.61	86.7
HORVU5Hr1G074160.1	Barley	cytosol	29.78	84.62
TraesCS7A01G036200.2	Wheat	golgi	94.4	84.35
HORVU4Hr1G076680.1	Barley	cytosol	30.14	84.34
Os06t0114000-02	Rice	plastid	91.16	84.03
Zm00001d045544_P002	Maize	plastid	90.79	83.83
Zm00001d016540_P001	Maize	cytosol	15.7	83.65
TraesCS7D01G032800.1	Wheat	cytosol	94.4	83.15
CDX75715	Canola	cytosol	84.3	82.95
HORVU2Hr1G107410.2	Barley	cytosol	29.78	82.5
CDX82537	Canola	plastid	85.2	80.41
Bra001507.1-P	Field mustard	plastid	85.38	80.17
CDX75713	Canola	plastid	85.38	79.76
GSMUA_Achr3P27620_001	Banana	plastid	87.73	79.41
KRH43861	Soybean	plastid	84.48	79.05
KRH13605	Soybean	nucleus	84.3	79.02
GSMUA_Achr9P23240_001	Banana	plastid	87.18	78.92
AT3G13470.1	Thale cress	plastid	84.84	78.86
AT1G55490.3	Thale cress	plastid	85.2	78.67
PGSC0003DMT400061700	Potato	extracellular	85.02	78.63
Solyc01g028810.2.1	Tomato	plastid	84.84	78.46
CDY08245	Canola	plastid	84.48	78.0
VIT_06s0004g00240.t01	Wine grape	plastid	85.2	77.63
Bra011919.1-P	Field mustard	plastid	85.02	77.47
CDY32855	Canola	plastid	82.67	77.1
Zm00001d053279_P001	Maize	mitochondrion	21.84	77.07
VIT_09s0002g03930.t01	Wine grape	plastid	84.66	77.01
AT5G56500.2	Thale cress	plastid	82.67	76.72
Bra028922.1-P	Field mustard	plastid	81.77	76.65
CDY11918	Canola	plastid	81.41	75.8
Zm00001d046709_P001	Maize	mitochondrion	21.48	75.8
Solyc03g120850.2.1	Tomato	plastid	82.67	75.7
PGSC0003DMT400006501	Potato	plastid	82.49	75.54
CDY36809	Canola	plastid	81.95	74.79
CDY26100	Canola	plastid	84.66	74.68
CDY32775	Canola	cytosol	11.37	74.12
HORVU6Hr1G005220.3	Barley	plastid	77.62	71.91
CDX72433	Canola	endoplasmic reticulum	40.25	70.57
HORVU4Hr1G066820.2	Barley	cytosol	29.6	69.79
Zm00001d037526_P001	Maize	plastid	22.2	69.49
Bra030858.1-P	Field mustard	cytosol	84.48	67.92
CDY02438	Canola	cytosol	84.66	67.29
HORVU6Hr1G000180.2	Barley	plastid	77.8	66.21
CDY23605	Canola	cytosol	51.44	65.67
HORVU2Hr1G077410.18	Barley	plastid	61.19	57.07
CDY56074	Canola	plastid	48.74	56.84
CDY10557	Canola	endoplasmic reticulum, plastid	84.84	56.69
CDY43988	Canola	cytosol	51.81	55.84
Bra027431.1-P	Field mustard	cytosol	51.99	55.49
CDY10302	Canola	extracellular	5.96	50.77
CDX86994	Canola	mitochondrion, plastid	60.47	47.72
HORVU5Hr1G125130.1	Barley	plastid	49.46	46.68
HORVU2Hr1G109400.1	Barley	cytosol	7.58	45.65
HORVU2Hr1G011340.1	Barley	cytosol	13.18	44.24
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	44.58	42.51
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	47.11	41.83
CDY40825	Canola	endoplasmic reticulum, vacuole	15.88	41.31
HORVU4Hr1G078820.3	Barley	plastid	45.67	40.1
HORVU1Hr1G038680.8	Barley	mitochondrion	46.21	38.27
HORVU0Hr1G038830.17	Barley	plastid	40.43	37.97
CDX85007	Canola	cytosol, plastid	46.75	25.8
HORVU4Hr1G071510.2	Barley	cytosol	27.62	21.49

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
UniProt:A0A287VF44	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU7Hr1G006490	EnsemblPlants:HORVU7Hr1G006490.2	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF8
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI000B4659CB
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:8553570..8557557

Molecular Weight (calculated)

59385.6 Da

IEP (calculated)

4.729

GRAVY (calculated)

-0.077

Length

554 amino acids

Sequence
(BLAST)

001: KRFDEVGVNK LADLVGVTLG PKGRNVVLES KYGSPKIVND GVTVAREVEL EDPVENIGAK LVRQAAAKTN DLAGDGTTTS VVLAQGLIAE GVKVIAAGAN
101: PVQITRGIEK TAKALVLELK KMSKEVEDSE LADVAAVSAG NNYEIGNMIA EAMSKVGRKG VVTLEEGRSS ENNLYVVEGM QFERGYISPY FVTDSEKMTT
201: EYENCKLLLV DKKITNARDL INVLEEAIRG QYPILIIAED IEQEALATLV VNKLRGSLKI CAIKAPGFGE RKTQYLDDIA ILTGGTVIRD EVGLTLDKAD
301: NTVLGTAAKV VLTKESTTIV GDGSTQEEVT KRVAQIKNLI EVAEQDYEKE KLNERIAKLA GGVAVIQVGA QTETELKEKK LRVEDALNAT KAAVEEGIVV
401: GGGCTLLRLA AKVDAIKDTL ENDEQKVGAE IVRRALCYPL KLIAKNAGVN GSVVTEKVLS NDNFKFGYNA ATGQYEDLMA AGIIDPTKVV RCCLEHAASV
501: AKTFLTSDVV VVEIKEPEPA PLVNPMDNSG KLQTPFSRLR ILMSDGGVSP EDVV

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.