Factsheet for HORVU1Hr1G038680.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G162300.1	Wheat	mitochondrion	84.16	98.08
TraesCS1A01G145000.1	Wheat	mitochondrion	84.16	98.08
TraesCS1D01G144000.1	Wheat	mitochondrion	83.71	97.56
Os10t0462900-01	Rice	mitochondrion	81.76	95.3
Zm00001d014090_P002	Maize	mitochondrion	81.76	94.8
EER94121	Sorghum	mitochondrion	81.32	94.28
Zm00001d032789_P001	Maize	plastid	81.02	94.1
VIT_05s0051g00340.t01	Wine grape	mitochondrion	76.83	89.39
KRH33513	Soybean	mitochondrion	74.89	87.13
GSMUA_Achr10P...	Banana	mitochondrion	74.59	86.78
Bra001934.1-P	Field mustard	mitochondrion	74.59	86.48
KRG90277	Soybean	mitochondrion	74.29	86.43
KRH34594	Soybean	mitochondrion	74.44	86.31
KRG92192	Soybean	mitochondrion	74.14	86.26
HORVU4Hr1G078820.3	Barley	plastid	81.32	86.21
GSMUA_Achr1P11160_001	Banana	mitochondrion	74.44	86.16
CDX94835	Canola	mitochondrion	74.29	86.14
CDX93002	Canola	mitochondrion	70.7	86.0
AT3G23990.1	Thale cress	mitochondrion	74.14	85.96
Solyc05g053470.2.1	Tomato	plastid	73.39	85.69
PGSC0003DMT400069855	Potato	mitochondrion	73.09	85.34
PGSC0003DMT400030265	Potato	mitochondrion	72.65	84.52
CDX84697	Canola	mitochondrion	70.85	84.19
CDY72107	Canola	mitochondrion	38.56	84.04
AT2G33210.1	Thale cress	mitochondrion	73.39	83.93
Solyc09g091180.2.1	Tomato	extracellular, mitochondrion, nucleus, unclear	72.35	83.59
Bra022931.1-P	Field mustard	mitochondrion	69.36	83.3
Bra005514.1-P	Field mustard	mitochondrion	69.06	82.65
CDX79518	Canola	cytosol	24.81	82.18
CDY17152	Canola	mitochondrion	70.4	82.06
CDY59050	Canola	cytosol	41.41	81.95
CDY19471	Canola	mitochondrion	72.35	81.62
CDY59049	Canola	mitochondrion	23.47	72.02
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	58.89	67.81
Bra021836.1-P	Field mustard	cytosol	44.1	66.0
GSMUA_Achr10P...	Banana	cytosol	12.86	62.32
CDY66712	Canola	mitochondrion	55.9	62.02
CDY37741	Canola	mitochondrion	55.01	60.23
HORVU2Hr1G107410.2	Barley	cytosol	14.35	48.0
HORVU4Hr1G076680.1	Barley	cytosol	14.2	47.98
HORVU5Hr1G074160.1	Barley	cytosol	13.6	46.67
HORVU7Hr1G006490.2	Barley	cytosol	38.27	46.21
HORVU5Hr1G125130.1	Barley	plastid	37.52	42.76
HORVU6Hr1G005220.3	Barley	plastid	36.92	41.3
HORVU2Hr1G109400.1	Barley	cytosol	5.68	41.3
HORVU2Hr1G011340.1	Barley	cytosol	10.01	40.61
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	37.22	39.9
HORVU2Hr1G077410.18	Barley	plastid	34.53	38.89
HORVU6Hr1G000180.2	Barley	plastid	37.67	38.71
HORVU4Hr1G066820.2	Barley	cytosol	13.3	37.87
HORVU0Hr1G038830.17	Barley	plastid	33.33	37.8
HORVU4Hr1G071510.2	Barley	cytosol	38.56	36.24

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A287F6T5	InterPro:Chaperonin_Cpn60_CS
InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU1Hr1G038680
EnsemblPlants:HORVU1Hr1G038680.8	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	PFAM:PF00118
PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF85	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B481661	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:269209870..269220056

Molecular Weight (calculated)

71600.1 Da

IEP (calculated)

8.096

GRAVY (calculated)

-0.034

Length

669 amino acids

Sequence
(BLAST)

001: KTLNPSGRFW ILLASSLLHP SPLLSKIRLS LPPFPFLLPK KQPELALHLT SAPRPPSLHA PRSPRHLAAF AMYRAAASLA SKARQAGSSA RQVGSRLAWS
101: RNYAAKDIRF GVEARASMLR GVEELADAVK VTMGPKGRTV IIEQSFGAPK VTKDGVTVAK SIEFKDRVKN VGASLVKQVA NATNDSAGDG TTCATVLTKA
201: IFTEGCKSVA AGMNAMDLRR GISMAVDDVV TNLKGMARMI STSEEIAQVG TISANGEREI GELIAKAMEK VGKEGVITIA DGNTLYNELE VVEGMKLDRG
301: YISPYFVTNQ KTQKCELEDP LILIHDKKVS NMHAVVKVLE MALKKQKPLL IVAEDLESEA LGTLILNKLR AGIKVSKFNL FFILTSVWPV VLIQCGIQVC
401: AVKAPGFGEN RKANLQDLAI LTGGEVITEE LGMNLENFDP QMLGTCKKVT VSKDDTVILD GAGDKKNIEE RAEQIRSAIE QSTSDYDKEK LQERLAKLSG
501: GVAVLKIGGA SEAEVSEKKD RVTDALNATK AAVEEGIVPG GGVALLYASK ALDKLETANF DQKIGVQIIQ NALKTPVYTI ASNAGVEGAV VVGKLLEQDN
601: TDLGYDAAKG EYVDMVKVGI IDPLKVIRTA LVDAASVSSL MTTTEAIIVE IPKEEKEAPG MGGMGGMDY

Best Arabidopsis Sequence Match ( AT2G33210.2 )
(BLAST)

001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKAPGFGEN RKANLHDLAA LTGAQVITEE LGMNLDNIDL SMFGNCKKVT VSKDDTVVLD GAGDKQAIGE RCEQIRSMVE ASTSDYDKEK LQERLAKLSG
401: GVAVLKIGGA SETEVSEKKD RVTDALNATK AAVEEGIVPG GGVALLYASK ELEKLSTANF DQKIGVQIIQ NALKTPVYTI ASNAGVEGAV VVGKLLEQDN
501: PDLGYDAAKG EYVDMIKAGI IDPLKVIRTA LVDAASVSSL LTTTEAVVTE IPTKEVASPG MGGGGMGGMG GMGGMGGMGF

Arabidopsis Description

HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.