Factsheet for Bra021836.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37741	Canola	mitochondrion	99.11	72.5
Bra022931.1-P	Field mustard	mitochondrion	72.26	57.99
Bra005514.1-P	Field mustard	mitochondrion	71.14	56.89
AT2G33210.1	Thale cress	mitochondrion	69.8	53.33
Bra001934.1-P	Field mustard	mitochondrion	67.11	51.99
GSMUA_Achr10P...	Banana	mitochondrion	66.44	51.65
Zm00001d014090_P002	Maize	mitochondrion	66.44	51.47
TraesCS1D01G144000.1	Wheat	mitochondrion	65.77	51.22
TraesCS1B01G162300.1	Wheat	mitochondrion	65.77	51.22
TraesCS1A01G145000.1	Wheat	mitochondrion	65.77	51.22
Os10t0462900-01	Rice	mitochondrion	65.77	51.22
EER94121	Sorghum	mitochondrion	66.0	51.13
Zm00001d032789_P001	Maize	plastid	65.77	51.04
Solyc05g053470.2.1	Tomato	plastid	65.32	50.96
PGSC0003DMT400069855	Potato	mitochondrion	65.32	50.96
GSMUA_Achr1P11160_001	Banana	mitochondrion	65.77	50.87
Os03t0143400-01	Rice	mitochondrion	65.32	50.61
TraesCS4B01G307700.1	Wheat	mitochondrion	64.43	50.0
TraesCS4A01G409100.1	Wheat	mitochondrion	64.43	50.0
PGSC0003DMT400030265	Potato	mitochondrion	63.31	49.22
Solyc09g091180.2.1	Tomato	extracellular, mitochondrion, nucleus, unclear	63.31	48.88
KXG40202	Sorghum	cytosol	43.85	48.16
HORVU4Hr1G078820.3	Barley	plastid	64.43	45.64
Bra001524.1-P	Field mustard	mitochondrion	57.72	45.1
HORVU1Hr1G038680.8	Barley	mitochondrion	66.0	44.1
TraesCS4D01G305900.1	Wheat	golgi	64.43	43.77
TraesCS4B01G266200.1	Wheat	cytosol	37.58	40.48
Bra000498.1-P	Field mustard	mitochondrion	32.66	27.29
Bra028922.1-P	Field mustard	plastid	36.02	27.24
Bra012462.1-P	Field mustard	plastid	36.24	26.69
Bra001507.1-P	Field mustard	plastid	34.9	26.44
Bra011919.1-P	Field mustard	plastid	35.35	25.99
Bra034383.1-P	Field mustard	plastid	33.78	25.81
Bra011985.1-P	Field mustard	plastid	33.78	25.81
HORVU4Hr1G071510.2	Barley	cytosol	40.72	25.56
Bra023694.1-P	Field mustard	plastid	31.77	24.57
GSMUA_Achr10P...	Banana	cytosol	7.38	23.91
Bra030858.1-P	Field mustard	cytosol	35.35	22.93
Bra027431.1-P	Field mustard	cytosol	21.48	18.5

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.50.7.10	MapMan:35.1	EnsemblPlantsGene:Bra021836	EnsemblPlants:Bra021836.1	EnsemblPlants:Bra021836.1-P
InterPro:Chaperone_TCP-1	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4DZ89	PFAM:PF00118	PRINTS:PR00304
PANTHER:PTHR11353	PANTHER:PTHR11353:SF85	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf
UniParc:UPI00025452D5	:	:	:	:	:

Description

AT2G33210 (E=1e-086) HSP60-2 | HSP60-2 (HEAT SHOCK PROTEIN 60-2); ATP binding

Coordinates

chrA04:-:14794237..14797491

Molecular Weight (calculated)

48135.8 Da

IEP (calculated)

6.916

GRAVY (calculated)

-0.222

Length

447 amino acids

Sequence
(BLAST)

001: MLSSTRSYSA KDIRSGVKEL ADTGQVTIGP KGCNVTIEQK DDGSITITQS WRAPKVTKDD VTVAKSNESK GRVKNVGASP VKQVAKATNN VAGDGPTYAT
101: VLTRAIFTEA CKSVTPEKSA YHAAYNAMHL RLGIKLAVDT VVKTLKSRAR MISTFEEIAQ VGTASANGDR EIGELIAKAM ESVGKEGVII VQGGNTLFNE
201: MEVVEGMKID RGYRSPLFIT NEKYQTCELE DPLILIHEKE ITSPDSTSTV LESALRVITE ERGMSLEKIE LGMLGTCKKV IVSKDNTVFI GGAGDKKYIG
301: ERCEQIGGTS EREVSEKIDR VNNALNATKA ALEEGIVPGG GVALLYASKE LEKLSTNYTS QKDGVQIIQN ALKIPVYTIA SKAGVDGKVI VDKLLESNNP
401: DIGYDAAKGE YVDMVKSGII DPVKMIRTAL VDAARDSNGL KIYCHFL

Best Arabidopsis Sequence Match ( AT2G33210.2 )
(BLAST)

001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKAPGFGEN RKANLHDLAA LTGAQVITEE LGMNLDNIDL SMFGNCKKVT VSKDDTVVLD GAGDKQAIGE RCEQIRSMVE ASTSDYDKEK LQERLAKLSG
401: GVAVLKIGGA SETEVSEKKD RVTDALNATK AAVEEGIVPG GGVALLYASK ELEKLSTANF DQKIGVQIIQ NALKTPVYTI ASNAGVEGAV VVGKLLEQDN
501: PDLGYDAAKG EYVDMIKAGI IDPLKVIRTA LVDAASVSSL LTTTEAVVTE IPTKEVASPG MGGGGMGGMG GMGGMGGMGF

Arabidopsis Description

HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.