Factsheet for Bra001507.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82537	Canola	plastid	99.32	99.83
AT3G13470.1	Thale cress	plastid	95.59	94.63
Bra011919.1-P	Field mustard	plastid	92.37	89.64
Zm00001d035937_P001	Maize	plastid	86.78	88.43
EER89076	Sorghum	plastid	86.44	88.08
VIT_06s0004g00240.t01	Wine grape	plastid	89.66	87.01
KRH13605	Soybean	nucleus	87.12	86.97
KRH43861	Soybean	plastid	86.95	86.66
PGSC0003DMT400061700	Potato	extracellular	87.97	86.64
Solyc01g028810.2.1	Tomato	plastid	87.97	86.64
TraesCS6B01G012000.1	Wheat	cytosol	60.17	86.37
HORVU7Hr1G006490.2	Barley	cytosol	80.17	85.38
Zm00001d045544_P002	Maize	plastid	86.78	85.33
Os06t0114000-02	Rice	plastid	86.44	84.86
Bra028922.1-P	Field mustard	plastid	84.92	84.77
GSMUA_Achr3P27620_001	Banana	plastid	87.29	84.15
HORVU4Hr1G076680.1	Barley	cytosol	28.14	83.84
GSMUA_Achr9P23240_001	Banana	plastid	86.95	83.82
TraesCS4A01G452700.2	Wheat	plastid	82.88	83.73
HORVU5Hr1G074160.1	Barley	cytosol	27.46	83.08
HORVU2Hr1G107410.2	Barley	cytosol	28.14	83.0
Os02t0102900-01	Rice	plastid	83.22	82.11
TraesCS6A01G006400.1	Wheat	golgi	83.22	82.11
TraesCS6D01G009100.1	Wheat	golgi	82.54	81.44
TraesCS6B01G011800.1	Wheat	plastid	81.69	81.28
TraesCS6B01G012100.3	Wheat	plastid	82.2	80.83
TraesCS7A01G036200.2	Wheat	golgi	84.92	80.81
KXG29249	Sorghum	plastid	82.71	80.79
TraesCS7D01G032800.1	Wheat	cytosol	84.92	79.65
Bra030858.1-P	Field mustard	cytosol	92.37	79.1
Zm00001d016540_P001	Maize	cytosol	13.9	78.85
Zm00001d054089_P002	Maize	plastid	81.53	77.96
TraesCS6B01G039300.2	Wheat	plastid	76.61	75.59
TraesCS6A01G028100.1	Wheat	plastid	76.27	75.25
TraesCS6D01G031400.1	Wheat	plastid	76.1	75.08
HORVU6Hr1G005220.3	Barley	plastid	75.93	74.92
Zm00001d053279_P001	Maize	mitochondrion	19.83	74.52
Zm00001d046709_P001	Maize	mitochondrion	19.49	73.25
GSMUA_Achr11P...	Banana	plastid	86.27	73.13
HORVU6Hr1G000180.2	Barley	plastid	77.12	69.89
HORVU4Hr1G066820.2	Barley	cytosol	27.63	69.36
Zm00001d037526_P001	Maize	plastid	20.34	67.8
Bra012462.1-P	Field mustard	plastid	63.9	62.11
Bra027431.1-P	Field mustard	cytosol	53.73	61.08
Bra000498.1-P	Field mustard	mitochondrion	46.27	51.03
Bra034383.1-P	Field mustard	plastid	47.8	48.21
Bra011985.1-P	Field mustard	plastid	47.46	47.86
Bra001934.1-P	Field mustard	mitochondrion	44.75	45.75
Bra023694.1-P	Field mustard	plastid	43.73	44.64
Bra001524.1-P	Field mustard	mitochondrion	42.2	43.53
Bra022931.1-P	Field mustard	mitochondrion	40.85	43.27
Bra005514.1-P	Field mustard	mitochondrion	40.85	43.11
Bra021836.1-P	Field mustard	cytosol	26.44	34.9
Os02t0103100-01	Rice	plasma membrane, vacuole	0.34	1.37

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
EnsemblPlantsGene:Bra001507	EnsemblPlants:Bra001507.1	EnsemblPlants:Bra001507.1-P	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4CBC7	HAMAP:MF_00600
PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF8	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI00025408EB	SEG:seg	:

Description

AT3G13470 (E=5e-301) | chaperonin, putative

Coordinates

chrA03:+:16740832..16743852

Molecular Weight (calculated)

62722.7 Da

IEP (calculated)

5.699

GRAVY (calculated)

-0.055

Length

590 amino acids

Sequence
(BLAST)

001: MASTFTATSS LGSLIAPNAL KFPSSTFGKR QNVCSRRTHP AIVCAAKELH FNKDGSTIKK LQTGVNKLAD LVGVTLGPKG RNVVLESKYG SPKIVNDGVT
101: VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVHELKLMS KEVEDSELAD VAAVSAGNNP
201: EVGNMIAEAM SKVGRKGVVT LEEGKSAENH LYVVEGMQFD RGYISPYFVT DSEKMSVEYD NCKLLLVDKK VTNARDLVGV LEDAIRGGYP ILIIAEDIEQ
301: EALATLVVNK LRGTLKIAAL KAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KEMTTIVGDG STQEAVNKRV VQIKNLIEQA
401: EQEYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VAEGIVVGGG CTLLRLAAKV DAIKDTLEND EEKVGAEIVK RALSYPLKLI
501: AKNAGVNGSV VSEKVLANDN VKFGYNAATG KYEDLMVAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPAG NPMDNSGYGY

Best Arabidopsis Sequence Match ( AT3G13470.1 )
(BLAST)

001: MASTFTATSS LGSLLAPNAI KLSSATSISS SSFGRRHNVC VRRSRPAIVC AAKELHFNKD GTTIRKLQTG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
101: VNDGVTVARE VELEDPVENI GAKLVRQAAA KTNDLAGDGT TTSVVLAQGF IAEGVKVVAA GANPVLITRG IEKTAKALVN ELKLMSKEVE DSELADVAAV
201: SAGNNHEVGS MIAEAMSKVG RKGVVTLEEG KSAENNLYVV EGMQFDRGYI SPYFVTDSEK MSVEYDNCKL LLVDKKVTNA RDLVGVLEDA IRGGYPILII
301: AEDIEQEALA TLVVNKLRGT LKIAALKAPG FGERKSQYLD DIAILTGATV IREEVGLSLD KAGKEVLGNA SKVVLTKEMT TIVGDGTTQE AVNKRVVQIR
401: NLIEQAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK DTLENDEEKV GAEIVKRALS
501: YPLKLIAKNA GVNGSVVSEK VLANDNVKFG YNAATGKYED LMAAGIIDPT KVVRCCLEHA ASVAKTFLMS DCVVVEIPEP EPVPAGNPMD NSGYGY

Arabidopsis Description

CPN60B2Chaperonin 60 subunit beta 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJE4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.