Factsheet for HORVU4Hr1G076680.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G107410.2	Barley	cytosol	95.96	95.0
HORVU5Hr1G074160.1	Barley	cytosol	91.41	92.82
HORVU4Hr1G066820.2	Barley	cytosol	79.29	66.81
CDY32775	Canola	cytosol	26.26	61.18
HORVU2Hr1G109400.1	Barley	cytosol	19.7	42.39
CDY10302	Canola	extracellular	13.64	41.54
CDX72433	Canola	endoplasmic reticulum	53.54	33.54
TraesCS6D01G009100.1	Wheat	golgi	96.46	31.94
Os02t0102900-01	Rice	plastid	92.42	30.6
HORVU7Hr1G006490.2	Barley	cytosol	84.34	30.14
KXG29249	Sorghum	plastid	91.92	30.13
Zm00001d054089_P002	Maize	plastid	89.9	28.85
CDX75715	Canola	cytosol	81.82	28.77
AT5G56500.2	Thale cress	plastid	85.35	28.31
GSMUA_Achr3P27620_001	Banana	plastid	87.37	28.27
HORVU6Hr1G005220.3	Barley	plastid	85.35	28.26
Bra028922.1-P	Field mustard	plastid	84.34	28.26
KRH43861	Soybean	plastid	84.34	28.21
Bra001507.1-P	Field mustard	plastid	83.84	28.14
GSMUA_Achr9P23240_001	Banana	plastid	86.87	28.1
KRH13605	Soybean	nucleus	83.84	28.09
AT3G13470.1	Thale cress	plastid	84.34	28.02
CDX82537	Canola	plastid	82.83	27.94
CDY32855	Canola	plastid	83.33	27.78
CDY11918	Canola	plastid	83.33	27.73
AT1G55490.3	Thale cress	plastid	83.33	27.5
VIT_09s0002g03930.t01	Wine grape	plastid	84.34	27.42
CDY08245	Canola	plastid	82.83	27.33
CDY36809	Canola	plastid	83.33	27.18
CDX75713	Canola	plastid	81.31	27.15
Bra011919.1-P	Field mustard	plastid	83.33	27.14
VIT_06s0004g00240.t01	Wine grape	plastid	83.33	27.14
Solyc01g028810.2.1	Tomato	plastid	81.82	27.05
PGSC0003DMT400061700	Potato	extracellular	81.82	27.05
Solyc03g120850.2.1	Tomato	plastid	80.3	26.28
PGSC0003DMT400006501	Potato	plastid	80.3	26.28
CDY26100	Canola	plastid	82.32	25.96
HORVU2Hr1G011340.1	Barley	cytosol	20.71	24.85
Bra030858.1-P	Field mustard	cytosol	82.83	23.8
CDX86994	Canola	mitochondrion, plastid	83.84	23.65
HORVU6Hr1G000180.2	Barley	plastid	76.77	23.35
CDY02438	Canola	cytosol	81.82	23.24
CDY56074	Canola	plastid	54.04	22.53
CDY23605	Canola	cytosol	48.48	22.12
HORVU2Hr1G077410.18	Barley	plastid	60.1	20.03
CDY10557	Canola	endoplasmic reticulum, plastid	81.82	19.54
CDY43988	Canola	cytosol	48.99	18.87
Bra027431.1-P	Field mustard	cytosol	48.99	18.69
HORVU5Hr1G125130.1	Barley	plastid	51.01	17.21
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	49.49	15.71
HORVU4Hr1G078820.3	Barley	plastid	47.47	14.9
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	43.43	14.8
HORVU0Hr1G038830.17	Barley	plastid	43.94	14.75
CDX85007	Canola	cytosol, plastid	73.74	14.54
HORVU1Hr1G038680.8	Barley	mitochondrion	47.98	14.2
HORVU4Hr1G071510.2	Barley	cytosol	23.74	6.6
CDY40825	Canola	endoplasmic reticulum, vacuole	2.02	1.88
Os02t0103100-01	Rice	plasma membrane, vacuole	1.01	1.37

Protein Annotations

Gene3D:1.10.560.10	MapMan:35.1	UniProt:A0A287PRM6	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:HORVU4Hr1G076680	EnsemblPlants:HORVU4Hr1G076680.1	InterPro:IPR027413	PFAM:PF00118
PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF102	SUPFAM:SSF48592	UniParc:UPI000B467064
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:601269504..601271092

Molecular Weight (calculated)

21213.4 Da

IEP (calculated)

4.861

GRAVY (calculated)

-0.106

Length

198 amino acids

Sequence
(BLAST)

001: VIEHVSASEQ EYEKEKLNER IAKLSGGVAV IQVGAQTETE LKEKKLRVED ALNATKAAVE EGIVVGGGCT LLRLASKVDA IKETLENDEQ KVGAEIVRKS
101: LSYPLKLIAK NAGVNGSVVT EKVLVNDNFR YDYNAATGKY EDLMAAGIID PTKVVRCCLE HVASVAKTFI TSDAVVVDIK ESEQAPAANP MVGSGYGF

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.