CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011919.1-P	Field mustard	plastid	99.17	97.86
AT1G55490.3	Thale cress	plastid	96.5	96.5
CDY26100	Canola	plastid	99.5	95.06
CDX82537	Canola	plastid	90.33	92.33
CDX75713	Canola	plastid	90.17	91.23
CDX75715	Canola	cytosol	83.0	88.45
Zm00001d035937_P001	Maize	plastid	83.83	86.87
KRH13605	Soybean	nucleus	85.17	86.46
EER89076	Sorghum	plastid	83.17	86.18
KRH43861	Soybean	plastid	84.83	85.98
Solyc01g028810.2.1	Tomato	plastid	85.67	85.81
PGSC0003DMT400061700	Potato	extracellular	85.67	85.81
TraesCS6B01G012000.1	Wheat	cytosol	58.33	85.16
CDY11918	Canola	plastid	83.83	84.54
CDY32855	Canola	plastid	83.67	84.51
HORVU7Hr1G006490.2	Barley	cytosol	78.0	84.48
Os06t0114000-02	Rice	plastid	83.67	83.53
CDY02438	Canola	cytosol	97.0	83.5
Zm00001d045544_P002	Maize	plastid	83.5	83.5
GSMUA_Achr3P27620_001	Banana	plastid	85.0	83.33
GSMUA_Achr9P23240_001	Banana	plastid	84.83	83.17
TraesCS4A01G452700.2	Wheat	plastid	80.67	82.88
HORVU4Hr1G076680.1	Barley	cytosol	27.33	82.83
CDY36809	Canola	plastid	83.67	82.7
HORVU5Hr1G074160.1	Barley	cytosol	26.67	82.05
Os02t0102900-01	Rice	plastid	81.0	81.27
TraesCS6A01G006400.1	Wheat	golgi	81.0	81.27
HORVU2Hr1G107410.2	Barley	cytosol	27.0	81.0
TraesCS6B01G011800.1	Wheat	plastid	79.67	80.61
TraesCS6D01G009100.1	Wheat	golgi	80.33	80.6
KXG29249	Sorghum	plastid	81.0	80.46
TraesCS6B01G012100.3	Wheat	plastid	80.33	80.33
TraesCS7A01G036200.2	Wheat	golgi	82.5	79.84
CDX72433	Canola	endoplasmic reticulum	41.5	78.8
TraesCS7D01G032800.1	Wheat	cytosol	82.5	78.7
Zm00001d054089_P002	Maize	plastid	79.83	77.63
Zm00001d016540_P001	Maize	cytosol	13.33	76.92
TraesCS6B01G039300.2	Wheat	plastid	75.33	75.59
TraesCS6A01G028100.1	Wheat	plastid	75.17	75.42
TraesCS6D01G031400.1	Wheat	plastid	74.83	75.08
HORVU6Hr1G005220.3	Barley	plastid	74.5	74.75
CDY32775	Canola	cytosol	10.5	74.12
Zm00001d053279_P001	Maize	mitochondrion	19.17	73.25
GSMUA_Achr11P...	Banana	plastid	84.33	72.7
Zm00001d046709_P001	Maize	mitochondrion	18.83	71.97
CDY23605	Canola	cytosol	50.83	70.28
CDY10557	Canola	endoplasmic reticulum, plastid	96.83	70.08
HORVU4Hr1G066820.2	Barley	cytosol	27.17	69.36
HORVU6Hr1G000180.2	Barley	plastid	75.17	69.28
CDY56074	Canola	plastid	54.17	68.42
Zm00001d037526_P001	Maize	plastid	19.5	66.1
CDY20555	Canola	plastid	62.5	61.78
CDY66193	Canola	plastid	62.0	61.28
CDY43988	Canola	cytosol	51.17	59.73
CDY10302	Canola	extracellular	6.17	56.92
CDX86994	Canola	mitochondrion, plastid	59.0	50.43
CDY68896	Canola	cytosol	28.0	49.85
CDX83280	Canola	plastid	47.5	48.97
CDY30514	Canola	plastid	47.5	48.72
CDY31190	Canola	plastid	47.5	48.63
CDY04527	Canola	plastid	47.83	48.15
CDX79518	Canola	cytosol	15.67	46.53
CDX71396	Canola	plastid	40.83	46.31
CDX77147	Canola	plastid	47.5	45.82
CDX94835	Canola	mitochondrion	43.17	44.89
CDX93002	Canola	mitochondrion	40.83	44.55
CDY47184	Canola	plastid	42.83	44.46
CDY02601	Canola	plastid	42.67	44.29
CDX84697	Canola	mitochondrion	41.17	43.87
CDY72107	Canola	mitochondrion	22.33	43.65
CDY17152	Canola	mitochondrion	41.17	43.03
CDY59050	Canola	cytosol	24.17	42.9
CDY19471	Canola	mitochondrion	42.0	42.5
CDX82514	Canola	mitochondrion	40.17	42.13
CDX75733	Canola	mitochondrion	40.0	41.96
CDY40825	Canola	endoplasmic reticulum, vacuole	14.5	40.85
CDY31193	Canola	plastid	16.0	40.51
CDY59049	Canola	mitochondrion	13.17	36.24
CDY66712	Canola	mitochondrion	35.5	35.32
CDY37741	Canola	mitochondrion	34.17	33.55
CDX85007	Canola	cytosol, plastid	46.5	27.79
CDY56079	Canola	plastid	4.67	20.9
Os02t0103100-01	Rice	plasma membrane, vacuole	0.0	0.0

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
GO:A0A078F191	UniProt:A0A078F191	EnsemblPlants:CDY08245	ProteinID:CDY08245	ProteinID:CDY08245.1	InterPro:Chaperonin_Cpn60_CS
InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00125571001	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298
ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF164	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI0004EE021E	SEG:seg	:	:

Description

BnaA05g13740DBnaA05g13740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F191]

Coordinates

chrLK031984:-:354070..357589

Molecular Weight (calculated)

63876.0 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.107

Length

600 amino acids

Sequence
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLMNKL SSSSFGRRQN VCPRLRRSSP AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVAELKKMS KEVEDSELAD
201: VAAVSAGNNE EIGSMIAEAM SRVGRKGVVT LEEGKSAENA LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGHAAKVVLT KETSTIVGDG STQDAVQKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLEND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNEN VKYGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPAG NPMDNSGYGY

Best Arabidopsis Sequence Match ( AT1G55490.5 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.