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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 8
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021836.1-P Field mustard cytosol 72.5 99.11
CDY66712 Canola mitochondrion 89.53 90.71
CDX79518 Canola cytosol 25.53 77.23
CDX84697 Canola mitochondrion 68.09 73.89
CDY72107 Canola mitochondrion 36.66 72.96
CDY17152 Canola mitochondrion 67.59 71.95
CDY19471 Canola mitochondrion 67.59 69.65
AT2G33210.1 Thale cress mitochondrion 66.61 69.57
CDX94835 Canola mitochondrion 61.21 64.82
GSMUA_Achr10P... Banana mitochondrion 60.88 64.7
CDX93002 Canola mitochondrion 57.94 64.36
Zm00001d014090_P002 Maize mitochondrion 60.56 64.12
TraesCS1D01G144000.1 Wheat mitochondrion 60.23 64.11
Os10t0462900-01 Rice mitochondrion 60.07 63.94
Zm00001d032789_P001 Maize plastid 60.23 63.89
EER94121 Sorghum mitochondrion 60.23 63.78
TraesCS1A01G145000.1 Wheat mitochondrion 59.9 63.76
TraesCS1B01G162300.1 Wheat mitochondrion 59.9 63.76
PGSC0003DMT400069855 Potato mitochondrion 59.74 63.7
Solyc05g053470.2.1 Tomato plastid 59.57 63.53
Os03t0143400-01 Rice mitochondrion 59.9 63.43
TraesCS4B01G307700.1 Wheat mitochondrion 59.57 63.19
TraesCS4A01G409100.1 Wheat mitochondrion 59.57 63.19
GSMUA_Achr1P11160_001 Banana mitochondrion 59.74 63.15
PGSC0003DMT400030265 Potato mitochondrion 59.08 62.78
Solyc09g091180.2.1 Tomato extracellular, mitochondrion, nucleus, unclear 58.76 62.0
KXG40202 Sorghum cytosol 41.24 61.92
CDY59050 Canola cytosol 31.91 57.69
HORVU4Hr1G078820.3 Barley plastid 59.25 57.37
CDY59049 Canola mitochondrion 20.13 56.42
TraesCS4D01G305900.1 Wheat golgi 59.57 55.32
HORVU1Hr1G038680.8 Barley mitochondrion 60.23 55.01
CDX82514 Canola mitochondrion 51.39 54.9
CDX75733 Canola mitochondrion 51.06 54.55
TraesCS4B01G266200.1 Wheat cytosol 31.91 46.99
GSMUA_Achr10P... Banana cytosol 8.84 39.13
CDY11918 Canola plastid 34.7 35.63
CDY32855 Canola plastid 34.21 35.19
CDY36809 Canola plastid 34.21 34.43
CDX75715 Canola cytosol 31.59 34.28
CDX82537 Canola plastid 32.9 34.24
CDY08245 Canola plastid 33.55 34.17
CDX75713 Canola plastid 33.06 34.06
CDY20555 Canola plastid 33.22 33.44
CDY66193 Canola plastid 32.73 32.95
CDY26100 Canola plastid 33.55 32.64
CDY68896 Canola cytosol 18.0 32.64
CDX83280 Canola plastid 30.93 32.47
CDY30514 Canola plastid 30.93 32.31
CDY31190 Canola plastid 30.93 32.25
CDY32775 Canola cytosol 4.42 31.76
CDY04527 Canola plastid 30.93 31.71
CDY02601 Canola plastid 28.97 30.62
CDY47184 Canola plastid 28.81 30.45
CDY23605 Canola cytosol 21.6 30.41
CDX77147 Canola plastid 30.93 30.39
CDX71396 Canola plastid 25.7 29.68
CDY02438 Canola cytosol 33.55 29.41
HORVU4Hr1G071510.2 Barley cytosol 34.04 29.21
CDY56074 Canola plastid 22.59 29.05
CDX72433 Canola endoplasmic reticulum 14.73 28.48
CDY31193 Canola plastid 10.47 27.0
CDY43988 Canola cytosol 20.95 24.9
CDY10557 Canola endoplasmic reticulum, plastid 33.55 24.73
CDY10302 Canola extracellular 2.62 24.62
CDY40825 Canola endoplasmic reticulum, vacuole 7.2 20.66
CDX86994 Canola mitochondrion, plastid 23.08 20.09
CDY56079 Canola plastid 4.09 18.66
CDX85007 Canola cytosol, plastid 19.97 12.15
Protein Annotations
Gene3D:1.10.560.10Gene3D:3.30.260.10Gene3D:3.50.7.10MapMan:35.1GO:A0A078HJ89UniProt:A0A078HJ89
EnsemblPlants:CDY37741ProteinID:CDY37741ProteinID:CDY37741.1InterPro:Chaprnin_Cpn60InterPro:Cpn60/TCP-1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0009987GO:GO:0042026InterPro:GROEL-like_equatorial_sfEnsemblPlantsGene:GSBRNA2T00064643001
InterPro:GroEL-like_apical_dom_sfInterPro:IPR027409InterPro:IPR027410InterPro:IPR027413PFAM:PF00118PRINTS:PR00298
PANTHER:PTHR11353PANTHER:PTHR11353:SF85SUPFAM:SSF48592SUPFAM:SSF52029SUPFAM:SSF54849InterPro:TCP-1-like_intermed_sf
UniParc:UPI0004EE2011SEG:seg::::
Description
BnaA04g19270DBnaA04g19270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ89]
Coordinates
chrLK032406:+:285268..288898
Molecular Weight (calculated)
66247.7 Da
IEP (calculated)
7.732
GRAVY (calculated)
-0.201
Length
611 amino acids
Sequence
(BLAST)
001: MYRLVSNIAS QARIARKCTP QFGSMLSSTR SYSAKDIRSG VKELADTGQV TIGPKGCNVT IEQKDDGSIT ITQSWRAPKV TKDDVTVAKS NESKGRVKNV
101: GASPVKQVAK ATNNVAGDGP TYATVLTRAI FTEACKSVTP EKSAYHAAYN AMHLRLGIKL AVDTVVKTLK SRARMISTFE EIAQVGTASA NGDREIGELI
201: AKAMESVGKE GVITVQGGNT LFNELEVVEG MKIDRGYRSP LFITNEKYQT CELEDPLILI HEKEITSPDS TSTVLESALR FVNDPLLYIH DNKVHDIESL
301: SKVLDLALKK QRSLLIVAED LDSFSVAGLV WKTPRSNHVA RLGLRWKTPP GEMKVITEER GMSLEKIELG MLGTCKKVTV SKDNTVFIGG AGDKKYIGER
401: CEQIRSMVEA NESDYDKDML QDRLAKLSGS IAVIKIGGTS EREVSEKIDR VNNALNATKA ALEEGIVPGG GVALLYASKE LEKLSTNYTS QKDGVQIIQN
501: ALKIPVYTIA SKAGVDGKVI VDKLLESNNP DIGYDAAKGE YVDMVKSGII DPVKMIRTAL VDAARDSNGL KIYCHFFVSL LLTTTEAVVT EIPTKEDASP
601: VMGGGYGCMG F
Best Arabidopsis Sequence Match ( AT2G33210.1 )
(BLAST)
001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF
Arabidopsis Description
HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.