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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32775 Canola cytosol 46.15 35.29
HORVU5Hr1G074160.1 Barley cytosol 43.08 14.36
HORVU2Hr1G107410.2 Barley cytosol 43.08 14.0
HORVU4Hr1G076680.1 Barley cytosol 41.54 13.64
HORVU4Hr1G066820.2 Barley cytosol 33.85 9.36
CDX79518 Canola cytosol 24.62 7.92
TraesCS6B01G012000.1 Wheat cytosol 43.08 6.81
PGSC0003DMT400061700 Potato extracellular 60.0 6.51
Solyc01g028810.2.1 Tomato plastid 60.0 6.51
CDX75715 Canola cytosol 55.38 6.39
EER89076 Sorghum plastid 56.92 6.39
Zm00001d035937_P001 Maize plastid 56.92 6.39
TraesCS4A01G452700.2 Wheat plastid 56.92 6.34
Os06t0114000-02 Rice plastid 58.46 6.32
CDX82537 Canola plastid 56.92 6.3
VIT_06s0004g00240.t01 Wine grape plastid 58.46 6.25
CDX75713 Canola plastid 56.92 6.24
Zm00001d045544_P002 Maize plastid 56.92 6.17
CDY08245 Canola plastid 56.92 6.17
CDY32855 Canola plastid 55.38 6.06
CDY26100 Canola plastid 58.46 6.05
CDY11918 Canola plastid 55.38 6.05
GSMUA_Achr3P27620_001 Banana plastid 56.92 6.05
TraesCS7A01G036200.2 Wheat golgi 56.92 5.97
HORVU7Hr1G006490.2 Barley cytosol 50.77 5.96
GSMUA_Achr9P23240_001 Banana plastid 55.38 5.88
TraesCS7D01G032800.1 Wheat cytosol 56.92 5.88
CDY36809 Canola plastid 52.31 5.6
TraesCS6A01G028100.1 Wheat plastid 50.77 5.52
TraesCS6D01G031400.1 Wheat plastid 50.77 5.52
HORVU6Hr1G005220.3 Barley plastid 50.77 5.52
TraesCS6D01G009100.1 Wheat golgi 50.77 5.52
TraesCS6B01G039300.2 Wheat plastid 50.77 5.52
TraesCS6A01G006400.1 Wheat golgi 50.77 5.52
CDY02438 Canola cytosol 58.46 5.45
TraesCS6B01G011800.1 Wheat plastid 49.23 5.4
Os02t0102900-01 Rice plastid 49.23 5.35
KXG29249 Sorghum plastid 49.23 5.3
CDX86994 Canola mitochondrion, plastid 56.92 5.27
TraesCS6B01G012100.3 Wheat plastid 47.69 5.17
Zm00001d054089_P002 Maize plastid 47.69 5.02
GSMUA_Achr11P... Banana plastid 52.31 4.89
CDY23605 Canola cytosol 30.77 4.61
CDY10557 Canola endoplasmic reticulum, plastid 58.46 4.58
CDY43988 Canola cytosol 35.38 4.47
CDY66193 Canola plastid 40.0 4.28
CDY20555 Canola plastid 40.0 4.28
CDY59050 Canola cytosol 21.54 4.14
CDY68896 Canola cytosol 20.0 3.86
CDY17152 Canola mitochondrion 33.85 3.83
CDX84697 Canola mitochondrion 30.77 3.55
CDY19471 Canola mitochondrion 32.31 3.54
CDX85007 Canola cytosol, plastid 52.31 3.39
CDX94835 Canola mitochondrion 29.23 3.29
CDX83280 Canola plastid 27.69 3.09
CDX93002 Canola mitochondrion 26.15 3.09
CDY30514 Canola plastid 27.69 3.08
CDY31190 Canola plastid 27.69 3.07
CDY04527 Canola plastid 27.69 3.02
CDY47184 Canola plastid 26.15 2.94
CDY02601 Canola plastid 26.15 2.94
CDX77147 Canola plastid 27.69 2.89
CDX72433 Canola endoplasmic reticulum 13.85 2.85
CDY66712 Canola mitochondrion 24.62 2.65
CDX75733 Canola mitochondrion 23.08 2.62
CDX82514 Canola mitochondrion 23.08 2.62
CDY37741 Canola mitochondrion 24.62 2.62
CDY31193 Canola plastid 9.23 2.53
CDY56074 Canola plastid 15.38 2.11
CDY72107 Canola mitochondrion 7.69 1.63
CDY56079 Canola plastid 3.08 1.49
Os02t0103100-01 Rice plasma membrane, vacuole 3.08 1.37
Zm00001d037526_P001 Maize plastid 3.08 1.13
HORVU6Hr1G000180.2 Barley plastid 10.77 1.08
CDX71396 Canola plastid 7.69 0.95
CDY40825 Canola endoplasmic reticulum, vacuole 3.08 0.94
CDY59049 Canola mitochondrion 3.08 0.92
Zm00001d046709_P001 Maize mitochondrion 1.54 0.64
Zm00001d053279_P001 Maize mitochondrion 1.54 0.64
Zm00001d016540_P001 Maize cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY10302EnsemblPlantsGene:GSBRNA2T00032150001GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524
PANTHER:PTHR11353PANTHER:PTHR11353:SF164ProteinID:CDY10302ProteinID:CDY10302.1UniParc:UPI0004EE8667UniProt:A0A078FB84
MapMan:35.1:::::
Description
BnaC05g29770DBnaC05g29770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB84]
Coordinates
chrLK032002:+:244894..245750
Molecular Weight (calculated)
7376.0 Da
IEP (calculated)
7.341
GRAVY (calculated)
0.445
Length
65 amino acids
Sequence
(BLAST)
1: MLVSFYIGFI GFLRFFSGVY IHRCCLEHAA SVAKTFWMFD CVVVETKEPK LIPAGNPMDN SGYGY
Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)
001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY
Arabidopsis Description
CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.