CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72107	Canola	mitochondrion	70.18	49.84
CDX93002	Canola	mitochondrion	79.82	31.64
CDX94835	Canola	mitochondrion	80.28	30.33
AT3G23990.1	Thale cress	mitochondrion	77.98	29.46
VIT_05s0051g00340.t01	Wine grape	mitochondrion	76.15	28.87
KRH33513	Soybean	mitochondrion	76.15	28.87
KRH34594	Soybean	mitochondrion	75.69	28.6
KRG90277	Soybean	mitochondrion	75.23	28.52
KRG92192	Soybean	mitochondrion	75.23	28.52
GSMUA_Achr10P...	Banana	mitochondrion	73.85	28.0
Zm00001d014090_P002	Maize	mitochondrion	73.85	27.9
EER94121	Sorghum	mitochondrion	73.85	27.9
GSMUA_Achr1P11160_001	Banana	mitochondrion	73.85	27.85
Zm00001d032789_P001	Maize	plastid	73.39	27.78
CDX84697	Canola	mitochondrion	71.56	27.71
Os10t0462900-01	Rice	mitochondrion	72.94	27.7
TraesCS1A01G145000.1	Wheat	mitochondrion	72.02	27.35
TraesCS1B01G162300.1	Wheat	mitochondrion	72.02	27.35
CDY17152	Canola	mitochondrion	71.56	27.18
TraesCS4A01G409100.1	Wheat	mitochondrion	71.56	27.08
TraesCS4B01G307700.1	Wheat	mitochondrion	71.56	27.08
Os03t0143400-01	Rice	mitochondrion	71.56	27.04
TraesCS1D01G144000.1	Wheat	mitochondrion	70.64	26.83
CDY19471	Canola	mitochondrion	72.02	26.48
HORVU4Hr1G078820.3	Barley	plastid	72.48	25.04
CDY31193	Canola	plastid	27.06	24.89
CDX82514	Canola	mitochondrion	64.68	24.65
CDX75733	Canola	mitochondrion	64.22	24.48
TraesCS4D01G305900.1	Wheat	golgi	71.56	23.71
HORVU1Hr1G038680.8	Barley	mitochondrion	72.02	23.47
CDY66712	Canola	mitochondrion	57.34	20.73
CDY37741	Canola	mitochondrion	56.42	20.13
CDY40825	Canola	endoplasmic reticulum, vacuole	19.27	19.72
CDX71396	Canola	plastid	35.78	14.74
KXG40202	Sorghum	cytosol	26.61	14.25
TraesCS4B01G266200.1	Wheat	cytosol	26.15	13.73
CDY30514	Canola	plastid	35.78	13.33
CDX82537	Canola	plastid	35.78	13.29
CDY04527	Canola	plastid	36.24	13.26
CDX83280	Canola	plastid	35.32	13.23
CDY08245	Canola	plastid	36.24	13.17
CDY31190	Canola	plastid	35.32	13.14
CDY11918	Canola	plastid	35.78	13.11
CDY32855	Canola	plastid	35.32	12.96
CDX77147	Canola	plastid	36.7	12.86
CDY36809	Canola	plastid	35.78	12.85
CDY56074	Canola	plastid	27.98	12.84
CDX75713	Canola	plastid	34.4	12.65
CDY26100	Canola	plastid	36.24	12.58
CDY20555	Canola	plastid	33.95	12.19
CDX75715	Canola	cytosol	31.19	12.08
CDY66193	Canola	plastid	33.49	12.03
HORVU4Hr1G071510.2	Barley	cytosol	38.07	11.66
CDY02438	Canola	cytosol	36.24	11.33
CDY02601	Canola	plastid	26.15	9.86
CDY47184	Canola	plastid	25.69	9.69
CDY10557	Canola	endoplasmic reticulum, plastid	36.24	9.53
CDY23605	Canola	cytosol	18.81	9.45
CDY43988	Canola	cytosol	18.35	7.78
GSMUA_Achr10P...	Banana	cytosol	4.59	7.25
CDY59050	Canola	cytosol	7.34	4.73
CDY56079	Canola	plastid	2.29	3.73
CDY10302	Canola	extracellular	0.92	3.08
CDX85007	Canola	cytosol, plastid	12.84	2.79
CDX86994	Canola	mitochondrion, plastid	8.72	2.71
CDY68896	Canola	cytosol	4.13	2.67
CDX72433	Canola	endoplasmic reticulum	2.75	1.9
CDX79518	Canola	cytosol	1.38	1.49
CDY32775	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	MapMan:35.1	GO:A0A078J100	UniProt:A0A078J100	EnsemblPlants:CDY59049
ProteinID:CDY59049	ProteinID:CDY59049.1	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00025485001	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118
PANTHER:PTHR11353	PANTHER:PTHR11353:SF85	SUPFAM:SSF48592	InterPro:TCP-1-like_intermed_sf	UniParc:UPI0004EE0D1F	:

Description

BnaC07g48190DBnaC07g48190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J100]

Coordinates

chrLK033721:+:2528..3951

Molecular Weight (calculated)

23800.9 Da

IEP (calculated)

10.207

GRAVY (calculated)

-0.164

Length

218 amino acids

Sequence
(BLAST)

001: MFRFQSRFQG QVSSRMSWSR NYSVKEINFG VEARALMLKG VEELADAVRV TMGPKGCNVV IEQSWGAPKQ VANATNDVGG DGTTCATVLT MAILTEGCKS
101: VAAGMNAMDL RRGISMPVDA VVTNLKSRAR MISTSEEIAQ VGTISANGER EIGELIAKAM ERVGKEGVIT IQDGKTLIND WTEVIHPLTL SPIRKPKNVN
201: WKSLSFLSMR RRSHPSTL

Best Arabidopsis Sequence Match ( AT2G33210.1 )
(BLAST)

001: MYRLVSNVAS KARIARKCTS QIGSRLNSTR NYAAKDIRFG VEARALMLRG VEDLADAVKV TMGPKGRNVI IEQSWGAPKV TKDGVTVAKS IEFKDRIKNV
101: GASLVKQVAN ATNDVAGDGT TCATVLTRAI FTEGCKSVAA GMNAMDLRRG IKLAVDTVVT NLQSRARMIS TSEEIAQVGT ISANGDREIG ELIAKAMETV
201: GKEGVITIQD GKTLFNELEV VEGMKIDRGY ISPYFITNPK TQKCELEDPL ILIHEKKISN INAMVKVLEL ALKKQRPLLI VAEDVESDAL ATLILNKLRA
301: NIKVCAVKAP GFGENRKANL HDLAALTGAQ VITEELGMNL DNIDLSMFGN CKKVTVSKDD TVVLDGAGDK QAIGERCEQI RSMVEASTSD YDKEKLQERL
401: AKLSGGVAVL KIGGASETEV SEKKDRVTDA LNATKAAVEE GIVPGGGVAL LYASKELEKL STANFDQKIG VQIIQNALKT PVYTIASNAG VEGAVVVGKL
501: LEQDNPDLGY DAAKGEYVDM IKAGIIDPLK VIRTALVDAA SVSSLLTTTE AVVTEIPTKE VASPGMGGGG MGGMGGMGGM GGMGF

Arabidopsis Description

HSP60-2Chaperonin CPN60-like 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.