CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012462.1-P	Field mustard	plastid	99.01	99.01
CDY20555	Canola	plastid	98.19	98.19
AT1G26230.1	Thale cress	plastid	90.61	90.02
VIT_01s0010g00920.t01	Wine grape	mitochondrion	72.32	71.97
Solyc05g010240.2.1	Tomato	plastid	63.92	71.72
PGSC0003DMT400064673	Potato	cytosol	52.55	70.73
KRH75202	Soybean	plastid	67.87	68.1
KRH71056	Soybean	plastid	67.71	67.93
GSMUA_Achr9P18480_001	Banana	plastid	65.57	67.34
Os04t0443900-01	Rice	plastid	65.07	67.18
Zm00001d028409_P001	Maize	plastid	64.25	66.33
TraesCS2D01G310000.3	Wheat	plastid	62.77	65.02
TraesCS2B01G328500.3	Wheat	plastid	62.77	64.36
CDX75715	Canola	cytosol	59.31	63.94
CDX82537	Canola	plastid	61.78	63.88
CDX75713	Canola	plastid	61.94	63.41
HORVU2Hr1G077410.18	Barley	plastid	61.94	63.3
CDY32855	Canola	plastid	60.96	62.29
CDY08245	Canola	plastid	61.28	62.0
CDY11918	Canola	plastid	60.13	61.34
CDY36809	Canola	plastid	59.97	59.97
CDY26100	Canola	plastid	61.45	59.39
TraesCS2A01G311700.1	Wheat	plastid	62.77	58.8
CDX72433	Canola	endoplasmic reticulum	29.49	56.65
CDY32775	Canola	cytosol	7.74	55.29
CDY23605	Canola	cytosol	38.55	53.92
CDY02438	Canola	cytosol	61.45	53.52
CDY56074	Canola	plastid	36.57	46.74
CDY10557	Canola	endoplasmic reticulum, plastid	61.45	44.99
CDY68896	Canola	cytosol	24.55	44.21
CDX83280	Canola	plastid	42.01	43.81
CDY43988	Canola	cytosol	37.07	43.77
CDY30514	Canola	plastid	41.85	43.42
CDY31190	Canola	plastid	41.68	43.17
CDY04527	Canola	plastid	41.52	42.28
CDX94835	Canola	mitochondrion	40.03	42.11
CDX93002	Canola	mitochondrion	37.73	41.64
CDX84697	Canola	mitochondrion	38.55	41.56
CDY72107	Canola	mitochondrion	20.92	41.37
CDX77147	Canola	plastid	41.85	40.84
CDX71396	Canola	plastid	35.42	40.64
CDX79518	Canola	cytosol	13.51	40.59
CDY59050	Canola	cytosol	22.57	40.53
CDY10302	Canola	extracellular	4.28	40.0
CDY19471	Canola	mitochondrion	39.04	39.97
CDX82514	Canola	mitochondrion	37.56	39.86
CDY17152	Canola	mitochondrion	37.56	39.72
CDX75733	Canola	mitochondrion	37.4	39.69
CDY47184	Canola	plastid	36.24	38.06
CDY02601	Canola	plastid	36.24	38.06
CDY31193	Canola	plastid	14.5	37.13
CDX86994	Canola	mitochondrion, plastid	41.35	35.76
CDY40825	Canola	endoplasmic reticulum, vacuole	12.52	35.68
CDY66712	Canola	mitochondrion	33.61	33.83
CDY59049	Canola	mitochondrion	12.03	33.49
CDY37741	Canola	mitochondrion	32.95	32.73
CDX85007	Canola	cytosol, plastid	34.93	21.12
CDY56079	Canola	plastid	3.95	17.91

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
GO:A0A078JF16	UniProt:A0A078JF16	EnsemblPlants:CDY66193	ProteinID:CDY66193	ProteinID:CDY66193.1	InterPro:Chaprnin_Cpn60
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987
GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00052265001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410
InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF81	SUPFAM:SSF48592
SUPFAM:SSF52029	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI0004EE94AB	SEG:seg	:

Description

BnaA07g36980DBnaA07g36980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF16]

Coordinates

chrLK035134:-:6475..10164

Molecular Weight (calculated)

66162.3 Da

IEP (calculated)

9.604

GRAVY (calculated)

-0.202

Length

607 amino acids

Sequence
(BLAST)

001: MASSLSALPL ADRNFRKNSS LLHSSSSRFV LRARAAAKEV HFNRDGSVTK KLKAGADMVA KLLGVTLGPK GRNVVLQNKY GPPKIVNDGE TVLKEIELED
101: PLENVGVKLV RQAGAKTNDL AGDGSTTSIV LAHGLITEGI KVVSAGINPI QVARGIEKTA KALVLELRSM SREIEDHELA DVAAVSAGND YEVGNMIANA
201: FQQVGRSGVV TIEKGKYLVN NLEVVEGMQF NRGYLSPYFV TDRRKREVEF HDCKLLLVDE KITNPKDMFK ILDSAVKEEF PVLIVAEEIE QDALAPVIRN
301: KLKGNLKAAA IKAPSFGERK SHCLDDLAIL TGATVIRDEM GLSLEKAGKE VLGTAKRVLV TKDSTLIVTN GDTQKAVEER VSQIKKLVQN TEENFQKKIL
401: NERIARLSGG IALIQVGAQT QVELKDKQLK VEDALNATKS AIEEGIVVGG GSALLRLAAK VDSIKDSLDN TEQKIGAEIF KKALSYPIRL IAKNAGTNGN
501: IVIEKVLLNE NMMYGYNAAK NQYEDLMMAG IIDPTKVVRC CLEHAASVAN TFLTSDAVVV EIKENKPRPM INPPMPTSPA ASSMFPDRNS PRFPQIMPRT
601: RNHFPRK

Best Arabidopsis Sequence Match ( AT1G26230.1 )
(BLAST)

001: MAFSQAALSA LPLSDRTFRK KPSSSSSSSP NFVLRVRAAA KEVHFNRDGS VTKKLQAGAD MVAKLLGVTL GPKGRNVVLQ NKYGPPRIVN DGETVLKEIE
101: LEDPLENVGV KLVRQAGAKT NDLAGDGSTT SIILAHGLIT EGIKVISAGT NPIQVARGIE KTTKALVLEL KSMSREIEDH ELAHVAAVSA GNDYEVGNMI
201: SNAFQQVGRT GVVTIEKGKY LVNNLEIVEG MQFNRGYLSP YFVTDRRKRE AEFHDCKLLL VDKKITNPKD MFKILDSAVK EEFPVLIVAE DIEQDALAPV
301: IRNKLKGNLK VAAIKAPAFG ERKSHCLDDL AIFTGATVIR DEMGLSLEKA GKEVLGTAKR VLVTKDSTLI VTNGFTQKAV DERVSQIKNL IENTEENFQK
401: KILNERVARL SGGIAIIQVG ALTQVELKDK QLKVEDALNA TKSAIEEGIV VGGGCALLRL ATKVDRIKET LDNTEQKIGA EIFKKALSYP IRLIAKNADT
501: NGNIVIEKVL SNKNTMYGYN AAKNQYEDLM LAGIIDPTKV VRCCLEHASS VAQTFLTSDC VVVEIKEIKP RPIINPPLPT SSPATSSMFP DRKLPRFPQI
601: MPRTRSHFPR K

Arabidopsis Description

CPN60B4Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.