Factsheet for Bra012462.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66193	Canola	plastid	99.01	99.01
AT1G26230.1	Thale cress	plastid	90.94	90.34
VIT_01s0010g00920.t01	Wine grape	mitochondrion	72.65	72.3
Solyc05g010240.2.1	Tomato	plastid	64.09	71.9
PGSC0003DMT400064673	Potato	cytosol	52.55	70.73
KRH75202	Soybean	plastid	67.55	67.77
GSMUA_Achr9P18480_001	Banana	plastid	65.9	67.68
KRH71056	Soybean	plastid	67.38	67.6
Os04t0443900-01	Rice	plastid	64.91	67.01
Zm00001d028409_P001	Maize	plastid	63.76	65.82
TraesCS2D01G310000.3	Wheat	plastid	63.1	65.36
TraesCS2B01G328500.3	Wheat	plastid	63.1	64.7
Bra001507.1-P	Field mustard	plastid	62.11	63.9
HORVU2Hr1G077410.18	Barley	plastid	61.94	63.3
Bra028922.1-P	Field mustard	plastid	60.3	61.93
Bra011919.1-P	Field mustard	plastid	61.45	61.35
TraesCS2A01G311700.1	Wheat	plastid	63.1	59.1
Bra030858.1-P	Field mustard	cytosol	61.45	54.14
Bra000498.1-P	Field mustard	mitochondrion	40.03	45.42
Bra027431.1-P	Field mustard	cytosol	37.89	44.32
Bra034383.1-P	Field mustard	plastid	42.17	43.76
Bra011985.1-P	Field mustard	plastid	41.68	43.25
Bra001934.1-P	Field mustard	mitochondrion	40.2	42.29
Bra022931.1-P	Field mustard	mitochondrion	37.73	41.11
Bra005514.1-P	Field mustard	mitochondrion	37.07	40.25
Bra001524.1-P	Field mustard	mitochondrion	37.56	39.86
Bra023694.1-P	Field mustard	plastid	36.41	38.24
Bra021836.1-P	Field mustard	cytosol	26.69	36.24

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
EnsemblPlantsGene:Bra012462	EnsemblPlants:Bra012462.1	EnsemblPlants:Bra012462.1-P	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009941	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4D7K2	PFAM:PF00118	PRINTS:PR00298
PANTHER:PTHR11353	PANTHER:PTHR11353:SF81	SUPFAM:SSF48592	SUPFAM:SSF52029	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348
UniParc:UPI0002540B0A	SEG:seg	:	:	:	:

Description

AT1G26230 (E=1e-301) | chaperonin, putative

Coordinates

chrA07:-:7454505..7457280

Molecular Weight (calculated)

66110.2 Da

IEP (calculated)

9.515

GRAVY (calculated)

-0.203

Length

607 amino acids

Sequence
(BLAST)

001: MASSLSALPL ADRNFRKNSS LSHSSSSRFV LRARAAAKEV HFNRDGSVTK KLKAGADMVA KLLGVTLGPK GRNVVLQNKY GPPKIVNDGE TVLKEIELED
101: PLENVGVKLV RQAGAKTNDL AGDGSTTSIV LAHGLITEGI KVVSAGINPI QVARGIDKTA KALVLELKSM SREIEDHELA DVAAVSAGND YEVGNMIANA
201: FQQVGRSGVV TIEKGKYLVN NLEVVEGMQF NRGYLSPYFV TDRRKREVEF HDCKLLLVDE KITNPKDMFK ILDSAVKEEF PVLIVAEEIE QDALAPVIRN
301: KLKGNLKAAA IKAPSFGERK SHCLDDLAIL TGATVIRDEM GLSLEKAGKE VLGTAKRVLV TKDSTLIVTN GDTQKAVEER VSQIKKLVQN TEENFQKKIL
401: NERIARLSGG IALIQVGAQT QVELKDKQLK VEDALNATKS AIEEGIVVGG GCALLRLAAK VDSIKDTLDN TEQKIGAEIF KKALSYPIRL IAKNAGTNGN
501: IVIEKVLLNE NMMYGYNAAK NQYEDLMMAG IIDPSKVVRC CLEHAASVAN TFLTSDAVVV EIKENKPRPM INPPMPTSPA ASSMFPDRNS PRFPQIMPRT
601: RNHFPRK

Best Arabidopsis Sequence Match ( AT1G26230.1 )
(BLAST)

001: MAFSQAALSA LPLSDRTFRK KPSSSSSSSP NFVLRVRAAA KEVHFNRDGS VTKKLQAGAD MVAKLLGVTL GPKGRNVVLQ NKYGPPRIVN DGETVLKEIE
101: LEDPLENVGV KLVRQAGAKT NDLAGDGSTT SIILAHGLIT EGIKVISAGT NPIQVARGIE KTTKALVLEL KSMSREIEDH ELAHVAAVSA GNDYEVGNMI
201: SNAFQQVGRT GVVTIEKGKY LVNNLEIVEG MQFNRGYLSP YFVTDRRKRE AEFHDCKLLL VDKKITNPKD MFKILDSAVK EEFPVLIVAE DIEQDALAPV
301: IRNKLKGNLK VAAIKAPAFG ERKSHCLDDL AIFTGATVIR DEMGLSLEKA GKEVLGTAKR VLVTKDSTLI VTNGFTQKAV DERVSQIKNL IENTEENFQK
401: KILNERVARL SGGIAIIQVG ALTQVELKDK QLKVEDALNA TKSAIEEGIV VGGGCALLRL ATKVDRIKET LDNTEQKIGA EIFKKALSYP IRLIAKNADT
501: NGNIVIEKVL SNKNTMYGYN AAKNQYEDLM LAGIIDPTKV VRCCLEHASS VAQTFLTSDC VVVEIKEIKP RPIINPPLPT SSPATSSMFP DRKLPRFPQI
601: MPRTRSHFPR K

Arabidopsis Description

CPN60B4Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.