Factsheet for TraesCS2A01G311700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G328500.3	Wheat	plastid	89.04	97.47
TraesCS2D01G310000.3	Wheat	plastid	88.12	97.44
HORVU2Hr1G077410.18	Barley	plastid	87.96	95.96
Os04t0443900-01	Rice	plastid	75.77	83.5
Zm00001d028409_P001	Maize	plastid	73.77	81.29
GSMUA_Achr9P18480_001	Banana	plastid	65.12	71.4
Solyc05g010240.2.1	Tomato	plastid	55.09	65.99
PGSC0003DMT400064673	Potato	cytosol	45.37	65.19
VIT_01s0010g00920.t01	Wine grape	mitochondrion	60.96	64.75
KRH75202	Soybean	plastid	59.88	64.13
KRH71056	Soybean	plastid	59.26	63.47
Bra012462.1-P	Field mustard	plastid	59.1	63.1
CDY20555	Canola	plastid	58.95	62.93
CDY66193	Canola	plastid	58.8	62.77
AT1G26230.1	Thale cress	plastid	58.95	62.52
TraesCS4A01G452700.2	Wheat	plastid	53.4	59.25
TraesCS6A01G006400.1	Wheat	golgi	54.01	58.53
TraesCS7A01G036200.2	Wheat	golgi	54.78	57.26
TraesCS6A01G028100.1	Wheat	plastid	52.78	57.19
TraesCS4A01G315500.2	Wheat	plastid	37.5	41.47
TraesCS1A01G145000.1	Wheat	mitochondrion	35.19	39.72
TraesCS4A01G409100.1	Wheat	mitochondrion	34.88	39.24
TraesCS1A01G361400.1	Wheat	mitochondrion	33.8	37.82
TraesCS5A01G366800.1	Wheat	plastid	33.33	36.55

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941
GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410
InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF81
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	EnsemblPlantsGene:TraesCS2A01G311700
EnsemblPlants:TraesCS2A01G311700.1	TIGR:cd03344	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:535414369..535419606

Molecular Weight (calculated)

70278.5 Da

IEP (calculated)

7.734

GRAVY (calculated)

-0.000

Length

648 amino acids

Sequence
(BLAST)

001: MSRMPLPPSP PPSLSSKAPT LPFSPKKTPP MPVYKDLHFN HDLSATKKLQ AGVDLVARLV GVTLGPKGRN VVLANKYGPP KIVNDGETVL KEVELEDPLE
101: NLGVKLVRQA GARTNDIAGD GCTTSIILAQ GLIAEGMKVL AAGMNPVQIA RGIGRTADAL VSELKLMSRE IEDHEIAHVA AVSAGNDYAV GNMISDAFKR
201: VGREGMVRIE NGRSTVNSLE VVEGMQFERG YLSPFFVTNH ANMSAEYTDC KILLVDKIIS DPRELLRVCF SAVKEDFPLL IIAEDVEEEA LSTLTRNKLS
301: GMIKVAAIKA PSFGEQKTQC LEDIAIITGG TVVRDDMGYT LEEAGKEFLG SASKVIVKKD STLIVTDGST LHAVEKRVAQ IKGQVENSKE RYQKKILGER
401: IARLSGAIAI IQVGAQTVIE LKDKKLRIED ALNATMAAIE EGVVVGGGCS LLRLSQKIDM IKESLDNLEQ KIGADIFKHA LSYPSTLIAN NAGMSGKFVI
501: EKVLANDNAS YGYNAANGCY EDLMASGILD PSKVVRCCIE HSAVVAKSFL TSDVVIVEAQ ESKPIRVRPP MPPRNLIPPM PASGKLYLHL HHHIERCIFS
601: SISFFSIWCL PWSDAFSFRY SSVAFTLLFG ATTNVRGMNN FVGKSVKI

Best Arabidopsis Sequence Match ( AT1G26230.1 )
(BLAST)

001: MAFSQAALSA LPLSDRTFRK KPSSSSSSSP NFVLRVRAAA KEVHFNRDGS VTKKLQAGAD MVAKLLGVTL GPKGRNVVLQ NKYGPPRIVN DGETVLKEIE
101: LEDPLENVGV KLVRQAGAKT NDLAGDGSTT SIILAHGLIT EGIKVISAGT NPIQVARGIE KTTKALVLEL KSMSREIEDH ELAHVAAVSA GNDYEVGNMI
201: SNAFQQVGRT GVVTIEKGKY LVNNLEIVEG MQFNRGYLSP YFVTDRRKRE AEFHDCKLLL VDKKITNPKD MFKILDSAVK EEFPVLIVAE DIEQDALAPV
301: IRNKLKGNLK VAAIKAPAFG ERKSHCLDDL AIFTGATVIR DEMGLSLEKA GKEVLGTAKR VLVTKDSTLI VTNGFTQKAV DERVSQIKNL IENTEENFQK
401: KILNERVARL SGGIAIIQVG ALTQVELKDK QLKVEDALNA TKSAIEEGIV VGGGCALLRL ATKVDRIKET LDNTEQKIGA EIFKKALSYP IRLIAKNADT
501: NGNIVIEKVL SNKNTMYGYN AAKNQYEDLM LAGIIDPTKV VRCCLEHASS VAQTFLTSDC VVVEIKEIKP RPIINPPLPT SSPATSSMFP DRKLPRFPQI
601: MPRTRSHFPR K

Arabidopsis Description

CPN60B4Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.