Factsheet for TraesCS5A01G366800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G038830.17	Barley	plastid	97.63	97.8
TraesCS5B01G368900.1	Wheat	plastid	97.46	97.63
TraesCS5D01G376000.1	Wheat	plastid	96.62	96.78
Os09t0563300-02	Rice	plastid	88.83	89.9
EER96340	Sorghum	plastid	88.16	89.06
VIT_01s0011g01680.t01	Wine grape	plastid	61.42	62.26
PGSC0003DMT400027020	Potato	cytosol	55.5	61.19
KRH50415	Soybean	plastid	59.9	60.31
Solyc02g068730.2.1	Tomato	plastid	58.88	59.69
AT5G18820.1	Thale cress	plastid	57.7	59.3
CDY47184	Canola	plastid	57.87	59.17
KRG89369	Soybean	plastid	58.88	59.08
Bra023694.1-P	Field mustard	plastid	57.53	58.82
CDY02601	Canola	plastid	57.19	58.48
TraesCS4A01G315500.2	Wheat	plastid	56.85	57.34
Zm00001d005373_P001	Maize	plastid	88.49	43.55
TraesCS6A01G006400.1	Wheat	golgi	39.42	38.96
TraesCS1A01G145000.1	Wheat	mitochondrion	37.73	38.85
TraesCS4A01G409100.1	Wheat	mitochondrion	37.56	38.54
TraesCS6A01G028100.1	Wheat	plastid	38.92	38.46
TraesCS4A01G452700.2	Wheat	plastid	37.9	38.36
TraesCS1A01G361400.1	Wheat	mitochondrion	36.72	37.48
TraesCS7A01G036200.2	Wheat	golgi	38.41	36.61
TraesCS2A01G311700.1	Wheat	plastid	36.55	33.33
GSMUA_Achr10P...	Banana	cytosol	64.64	31.16

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353
PANTHER:PTHR11353:SF121	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348
EnsemblPlantsGene:TraesCS5A01G366800	EnsemblPlants:TraesCS5A01G366800.1	TIGR:cd03344	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:+:566701292..566705468

Molecular Weight (calculated)

63303.1 Da

IEP (calculated)

6.154

GRAVY (calculated)

0.072

Length

591 amino acids

Sequence
(BLAST)

001: MPLTTASFAA PPCSSSSSWP PLPRWPCRLH RPAMVCRRRM AVRADVKVIS SGNACRRGLA AGIHKLADAV SVTLGPKGRN VVIDQDDVPK VINDGVTIAK
101: AIELPNSLEH AGAMLLQEIA SKTNSTVGDG TTTAIILARE IISLGLLAVA NGANPVALRK GIDKAVHELL EILKTKSIPV STKEDIKAVA SISAGNDEYV
201: GNLIADALEK IGPDGIIKIE SSSSIYTSVE VQEGMKIDKG YTSPHFITNP DKAIVEFENA RVLLTDQRVN EIQEILPLLE KTTQLSVPLL IIAEDISHSV
301: YSTLVLNKLN GLLNVAVVKC PGLGDEKKAI LQDIAIMTGA DFFVSDLGWG LQAITSDQLG MAQKITITSE STTIIAHPSM RPEIEARIMQ LKKDLEETTS
401: AYLKERFSAR IAKLSRGVAV IKVGAATEAE LEDRKLRVED AKNATFAAIS EGITPGGGVT YVELSKHIPS IMDLVDDPEE KIGVTIVGKA LLVPAMTIAR
501: NAGADGSAVV EKILESEWRV GYNAMTDKFE DLVEAGVVDP CRVARCVLQN SASIAGLILM TQAMMFDKIK KKKSPIPEIP GLPPLQINQN A

Best Arabidopsis Sequence Match ( AT1G55490.5 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.