CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023694.1-P	Field mustard	plastid	98.79	98.79
CDY02601	Canola	plastid	98.27	98.27
AT5G18820.1	Thale cress	plastid	93.08	93.57
VIT_01s0011g01680.t01	Wine grape	plastid	73.7	73.07
KRH50415	Soybean	plastid	71.28	70.19
KRG89369	Soybean	plastid	71.28	69.95
PGSC0003DMT400027020	Potato	cytosol	64.71	69.78
Solyc02g068730.2.1	Tomato	plastid	69.38	68.78
CDY68896	Canola	cytosol	35.81	61.42
CDX83280	Canola	plastid	59.69	59.28
CDY30514	Canola	plastid	59.69	58.97
CDY31190	Canola	plastid	59.69	58.87
Os09t0563300-02	Rice	plastid	59.0	58.39
EER96340	Sorghum	plastid	58.82	58.12
HORVU0Hr1G038830.17	Barley	plastid	59.17	57.97
CDY04527	Canola	plastid	59.69	57.89
TraesCS5A01G366800.1	Wheat	plastid	59.17	57.87
TraesCS5B01G368900.1	Wheat	plastid	58.82	57.63
TraesCS5D01G376000.1	Wheat	plastid	58.65	57.46
CDX71396	Canola	plastid	51.56	56.33
CDX77147	Canola	plastid	59.52	55.31
CDY31193	Canola	plastid	20.07	48.95
CDX75715	Canola	cytosol	42.91	44.05
CDX82537	Canola	plastid	44.46	43.78
CDY32855	Canola	plastid	44.46	43.27
CDX75713	Canola	plastid	44.29	43.17
CDY11918	Canola	plastid	44.29	43.03
CDY08245	Canola	plastid	44.46	42.83
CDX72433	Canola	endoplasmic reticulum	23.18	42.41
CDY36809	Canola	plastid	44.29	42.17
CDY26100	Canola	plastid	44.64	41.08
CDY23605	Canola	cytosol	30.45	40.55
CDX79518	Canola	cytosol	13.49	38.61
CDY02438	Canola	cytosol	44.64	37.02
CDX94835	Canola	mitochondrion	36.85	36.92
CDY59050	Canola	cytosol	21.28	36.39
CDY66193	Canola	plastid	38.06	36.24
CDY20555	Canola	plastid	38.06	36.24
CDX84697	Canola	mitochondrion	35.29	36.23
CDY19471	Canola	mitochondrion	37.02	36.09
CDX93002	Canola	mitochondrion	34.26	36.0
CDY17152	Canola	mitochondrion	35.64	35.89
CDY72107	Canola	mitochondrion	18.86	35.5
CDX82514	Canola	mitochondrion	34.78	35.14
CDX75733	Canola	mitochondrion	34.6	34.97
CDY43988	Canola	cytosol	30.45	34.24
CDY32775	Canola	cytosol	5.02	34.12
CDY56074	Canola	plastid	27.68	33.68
CDY10557	Canola	endoplasmic reticulum, plastid	44.64	31.12
GSMUA_Achr10P...	Banana	cytosol	65.57	30.91
CDY66712	Canola	mitochondrion	31.31	30.02
CDY37741	Canola	mitochondrion	30.45	28.81
Zm00001d005373_P001	Maize	plastid	59.52	28.64
CDY40825	Canola	endoplasmic reticulum, vacuole	10.21	27.7
CDY10302	Canola	extracellular	2.94	26.15
CDY59049	Canola	mitochondrion	9.69	25.69
CDX86994	Canola	mitochondrion, plastid	30.97	25.5
CDY56079	Canola	plastid	4.15	17.91
CDX85007	Canola	cytosol, plastid	25.43	14.64

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
GO:A0A078ICX0	UniProt:A0A078ICX0	EnsemblPlants:CDY47184	ProteinID:CDY47184	ProteinID:CDY47184.1	InterPro:Chaprnin_Cpn60
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009987	GO:GO:0042026
InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00086889001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
PFAM:PF00118	PRINTS:PR00298	PANTHER:PTHR11353	PANTHER:PTHR11353:SF172	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI0004EF11B3	SEG:seg	:

Description

BnaAnng08540DBnaAnng08540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICX0]

Coordinates

chrLK032702:+:23708..26504

Molecular Weight (calculated)

61199.4 Da

IEP (calculated)

6.374

GRAVY (calculated)

0.043

Length

578 amino acids

Sequence
(BLAST)

001: MFAVSPSYFS PATISPSRSG QGKKPQLPRK LLVVRAGGKR ILYGKDSREA LQAGIDKLAD AVSVTLGPRG RNVVLAESDT IKVINDGVTI AKAIELSDTI
101: ENAGATLIQE VAIKMNESAG DGTTTAIILA REMIKAGSLA IAFGANAVSV KNGMNKTVKE LVRVLQMKSF PVKGKSDVKA VASISAGNDE FVGNLIAETV
201: EKIGPDGVIS IETSSTSETS VIVEEGMKFD KGYMSPHFIT NQEKSTVEFD KAKILVTDQK ITSAKELVPL LEKTSQLSVP LLIIAEDISA EVLEILVVNK
301: KQGLINVAVV KCPGMLDGKK ALLQDIALMT GADYLAGDLG MSLMGATSDQ LGVARKVTIT ANSTTIVADP STKPEIQARI AQMKKDLAET DNSYMTGKIA
401: ERIAKLSGGV AVIKVGGHTE TELEDRKLRI EDAKNATFAA MREGIVPGGG ATYIHLLDEI PRIKKNLMED LYEQIGADIV ATALTAPAMV IATNAGVDGS
501: VVVEKTRELE WRSGYNAMSG RYEDLINAGI ADPCKVSRFA LQNAVSVAGI VLTTQAVLVE KIKQPKPAVP EVPGIPTS

Best Arabidopsis Sequence Match ( AT5G18820.1 )
(BLAST)

001: MFAVSPSSFS PTTISPRRSG QRNEPRKFSV VRAGAKRILY GKDSREKLQA GIDKLADAVS ITLGPRGRNV VLAEKDTIKV INDGVTIAKS IELPDTIENA
101: GATLIQEVAI KMNESAGDGT TTAIILAREM IKAGSLAIAF GANAVSVKNG MNKTVKELVR VLQMKSIPVQ GKNDIKAVAS ISAGNDEFVG NLIAETVEKI
201: GPDGVISIES SSTSETSVIV EEGMKFDKGY MSPHFITNQE KSTVEFDKAK ILVTDQKITS AKELVPLLEK TSQLSVPLLI IAEDISAEVL EILVVNKKQG
301: LINVAVVKCP GMLDGKKALL QDIALMTGAD YLSGDLGMSL MGATSDQLGV SRRVVITANS TTIVADASTK PEIQARIAQM KKDLAETDNS YLSKKIAERI
401: AKLTGGVAVI KVGGHTETEL EDRKLRIEDA KNATFAAMRE GIVPGGGATY IHLLDEIPRI KKNLMEDSYE QIGADIVAMA LTAPAMAIAT NAGVDGSVVV
501: QKTRELEWRS GYNAMSGKYE DLLNAGIADP CRVSRFALQN AVSVAGIILT TQAVLVEKIK QPKPAVPQVP GIPTS

Arabidopsis Description

CPN60A2Chaperonin 60 subunit alpha 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q56XV8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.