CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

cytosol 2
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G076680.1	Barley	cytosol	23.65	83.84
HORVU5Hr1G074160.1	Barley	cytosol	23.08	83.08
HORVU2Hr1G107410.2	Barley	cytosol	23.65	83.0
Zm00001d016540_P001	Maize	cytosol	12.11	81.73
TraesCS6B01G012000.1	Wheat	cytosol	46.01	78.59
CDY32775	Canola	cytosol	9.12	75.29
CDX72433	Canola	endoplasmic reticulum	33.62	74.68
Zm00001d053279_P001	Maize	mitochondrion	16.52	73.89
Zm00001d046709_P001	Maize	mitochondrion	16.38	73.25
HORVU4Hr1G066820.2	Barley	cytosol	23.08	68.94
Zm00001d037526_P001	Maize	plastid	17.38	68.93
CDX75715	Canola	cytosol	52.99	66.07
CDX82537	Canola	plastid	53.42	63.88
CDX75713	Canola	plastid	52.56	62.23
AT3G13470.1	Thale cress	plastid	52.42	61.74
HORVU7Hr1G006490.2	Barley	cytosol	47.72	60.47
Zm00001d035937_P001	Maize	plastid	48.86	59.24
EER89076	Sorghum	plastid	48.72	59.07
CDY08245	Canola	plastid	50.43	59.0
KRH13605	Soybean	nucleus	49.29	58.54
KRH43861	Soybean	plastid	49.15	58.28
Solyc01g028810.2.1	Tomato	plastid	49.15	57.6
PGSC0003DMT400061700	Potato	extracellular	49.0	57.43
Zm00001d045544_P002	Maize	plastid	48.86	57.17
CDY10302	Canola	extracellular	5.27	56.92
Os06t0114000-02	Rice	plastid	48.72	56.91
GSMUA_Achr3P27620_001	Banana	plastid	49.57	56.86
CDY32855	Canola	plastid	47.86	56.57
CDY26100	Canola	plastid	50.14	56.05
GSMUA_Achr9P23240_001	Banana	plastid	48.86	56.05
CDY11918	Canola	plastid	47.15	55.63
TraesCS4A01G452700.2	Wheat	plastid	46.15	55.48
TraesCS6A01G006400.1	Wheat	golgi	47.01	55.18
TraesCS6D01G009100.1	Wheat	golgi	46.87	55.02
TraesCS6B01G011800.1	Wheat	plastid	46.44	54.97
Os02t0102900-01	Rice	plastid	46.72	54.85
TraesCS6B01G012100.3	Wheat	plastid	46.72	54.67
CDY36809	Canola	plastid	47.15	54.53
TraesCS7A01G036200.2	Wheat	golgi	47.86	54.19
KXG29249	Sorghum	plastid	46.44	53.97
TraesCS7D01G032800.1	Wheat	cytosol	47.86	53.42
CDY23605	Canola	cytosol	32.48	52.53
Zm00001d054089_P002	Maize	plastid	45.87	52.19
CDY02438	Canola	cytosol	50.28	50.65
TraesCS6B01G039300.2	Wheat	plastid	43.02	50.5
TraesCS6A01G028100.1	Wheat	plastid	42.59	50.0
TraesCS6D01G031400.1	Wheat	plastid	42.45	49.83
HORVU6Hr1G005220.3	Barley	plastid	42.45	49.83
GSMUA_Achr11P...	Banana	plastid	48.58	48.99
CDY68896	Canola	cytosol	23.36	48.66
CDX79518	Canola	cytosol	13.68	47.52
HORVU6Hr1G000180.2	Barley	plastid	42.59	45.93
CDY43988	Canola	cytosol	33.19	45.33
CDY59050	Canola	cytosol	20.66	42.9
CDY10557	Canola	endoplasmic reticulum, plastid	50.43	42.7
CDY20555	Canola	plastid	36.18	41.85
CDY66193	Canola	plastid	35.76	41.35
CDY56074	Canola	plastid	24.36	36.0
CDX93002	Canola	mitochondrion	25.36	32.36
CDX83280	Canola	plastid	26.64	32.13
CDY30514	Canola	plastid	26.64	31.97
CDY31190	Canola	plastid	26.5	31.74
CDY04527	Canola	plastid	26.78	31.54
CDY47184	Canola	plastid	25.5	30.97
CDX94835	Canola	mitochondrion	25.36	30.85
CDY02601	Canola	plastid	25.36	30.8
CDX84697	Canola	mitochondrion	24.5	30.55
CDX77147	Canola	plastid	26.92	30.39
CDY19471	Canola	mitochondrion	25.5	30.19
CDY17152	Canola	mitochondrion	24.64	30.14
CDX82514	Canola	mitochondrion	24.22	29.72
CDX75733	Canola	mitochondrion	24.07	29.55
CDX71396	Canola	plastid	21.65	28.73
CDY66712	Canola	mitochondrion	21.51	25.04
CDY37741	Canola	mitochondrion	20.09	23.08
CDX85007	Canola	cytosol, plastid	32.05	22.41
CDY56079	Canola	plastid	3.99	20.9
CDY72107	Canola	mitochondrion	7.98	18.24
CDY40825	Canola	endoplasmic reticulum, vacuole	4.7	15.49
CDY59049	Canola	mitochondrion	2.71	8.72
Os02t0103100-01	Rice	plasma membrane, vacuole	1.71	8.22
CDY31193	Canola	plastid	2.56	7.59

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.10.560.10	Gene3D:3.30.200.20	Gene3D:3.50.7.10	MapMan:50.2.7	GO:A0A078DF45
EnsemblPlants:CDX86994	ProteinID:CDX86994	ProteinID:CDX86994.1	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00145846001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR027409	InterPro:IPR027413	InterPro:Kinase-like_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00118
PFAM:PF07714	PRINTS:PR00298	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR11353
PANTHER:PTHR11353:SF8	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EEE9DE	SEG:seg	:

Description

BnaC03g52640D

Coordinates

chrLK031848:+:1353394..1360074

Molecular Weight (calculated)

77246.0 Da

IEP (calculated)

5.626

GRAVY (calculated)

-0.083

Length

702 amino acids

Sequence
(BLAST)

001: MEAEILYSMS RLTRMKFLRI AANHFSGVFL HPICNLSLGR KCVVTLEEGK SAENYLYVVE GMQFDRGYIS PYFVTDSEKM SVEYENCKLL LVDKKVTNAR
101: DLVGVLEYAI RGGYPILIIA EDIEQEALAT LVVNKLRGTL KIAALKEPGF GERKSQYLDD IAILTGATVI REEVGLSLDK AAQEVLGNVS KVVLTKEMTT
201: IVGDGSTQEA VNKRVVQIKN LIEQAEQEYE KEKLNERIAK LSGGVAVIQV GAQTETELKE KKLRVEDALN ATKAAVAEGI VVGGGCTLLR LAAKVDAIKD
301: TLENDEEKVG AEIVKRALSY PLKLIAKNAG VNGSVVSEKV LANDNVKFGY NAATGKYEDL MVAGIIDPTK VVRCCLEHAA SVAKTFLMSD CVVVEIKEPE
401: PVPAGNPMDN SGYLQELDLS YNNLSGSIPE YLLKPCTDQE ETKSRERSSM RRKIGIGFGA GLTSVLFSLF FIISLRWFKK RSIQDRKSNT NDVDDFAIAP
501: HERVGYGELH KATCGFSLKN MIGSGNFGVV YKAVLGLENR VVSVKGDEFR ALVYEFLPNG SLDTWLHRER LEGISDTSRP LTLLERFNIA IDVASALEYL
601: HVNCHNPIAH CDLKPSNVLL DDDLTAHVSD YGLARLLLKF NQEFSLNQLS SGGVRGTIGY AAPEYGIGGQ PSIHGDVYSF GVLLLEIQFY SSQQSQSRLP
701: YC

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.