Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001507.1-P | Field mustard | plastid | 94.63 | 95.59 |
| CDX75713 | Canola | plastid | 94.97 | 95.45 |
| CDX82537 | Canola | plastid | 93.96 | 95.4 |
| AT1G55490.3 | Thale cress | plastid | 93.29 | 92.67 |
| CDX75715 | Canola | cytosol | 86.07 | 91.12 |
| KRH13605 | Soybean | nucleus | 87.92 | 88.66 |
| KRH43861 | Soybean | plastid | 87.42 | 88.01 |
| VIT_06s0004g00240.t01 | Wine grape | plastid | 89.43 | 87.66 |
| PGSC0003DMT400061700 | Potato | extracellular | 88.09 | 87.65 |
| Solyc01g028810.2.1 | Tomato | plastid | 88.09 | 87.65 |
| Zm00001d035937_P001 | Maize | plastid | 84.73 | 87.22 |
| AT5G56500.2 | Thale cress | plastid | 87.08 | 86.93 |
| EER89076 | Sorghum | plastid | 84.4 | 86.87 |
| TraesCS6B01G012000.1 | Wheat | cytosol | 59.73 | 86.62 |
| Os06t0114000-02 | Rice | plastid | 85.91 | 85.19 |
| HORVU7Hr1G006490.2 | Barley | cytosol | 78.86 | 84.84 |
| GSMUA_Achr9P23240_001 | Banana | plastid | 86.91 | 84.64 |
| GSMUA_Achr3P27620_001 | Banana | plastid | 86.75 | 84.48 |
| HORVU4Hr1G076680.1 | Barley | cytosol | 28.02 | 84.34 |
| Zm00001d045544_P002 | Maize | plastid | 84.73 | 84.17 |
| TraesCS4A01G452700.2 | Wheat | plastid | 82.05 | 83.73 |
| HORVU5Hr1G074160.1 | Barley | cytosol | 27.35 | 83.59 |
| TraesCS6A01G006400.1 | Wheat | golgi | 83.22 | 82.94 |
| HORVU2Hr1G107410.2 | Barley | cytosol | 27.68 | 82.5 |
| TraesCS6B01G011800.1 | Wheat | plastid | 81.71 | 82.12 |
| Os02t0102900-01 | Rice | plastid | 82.21 | 81.94 |
| TraesCS6D01G009100.1 | Wheat | golgi | 82.21 | 81.94 |
| TraesCS6B01G012100.3 | Wheat | plastid | 81.88 | 81.33 |
| KXG29249 | Sorghum | plastid | 82.38 | 81.29 |
| TraesCS7A01G036200.2 | Wheat | golgi | 84.06 | 80.81 |
| TraesCS7D01G032800.1 | Wheat | cytosol | 84.06 | 79.65 |
| Zm00001d054089_P002 | Maize | plastid | 81.38 | 78.61 |
| Zm00001d016540_P001 | Maize | cytosol | 13.26 | 75.96 |
| TraesCS6B01G039300.2 | Wheat | plastid | 76.17 | 75.92 |
| TraesCS6A01G028100.1 | Wheat | plastid | 76.01 | 75.75 |
| TraesCS6D01G031400.1 | Wheat | plastid | 75.67 | 75.42 |
| HORVU6Hr1G005220.3 | Barley | plastid | 75.5 | 75.25 |
| GSMUA_Achr11P... | Banana | plastid | 86.58 | 74.14 |
| Zm00001d053279_P001 | Maize | mitochondrion | 19.13 | 72.61 |
| CDY23605 | Canola | cytosol | 52.52 | 72.12 |
| Zm00001d046709_P001 | Maize | mitochondrion | 18.79 | 71.34 |
| HORVU6Hr1G000180.2 | Barley | plastid | 77.01 | 70.51 |
| HORVU4Hr1G066820.2 | Barley | cytosol | 27.68 | 70.21 |
| Zm00001d037526_P001 | Maize | plastid | 19.46 | 65.54 |
| CDY43988 | Canola | cytosol | 52.68 | 61.09 |
| Bra027431.1-P | Field mustard | cytosol | 52.85 | 60.69 |
| AT1G26230.1 | Thale cress | plastid | 61.91 | 60.39 |
| CDX86994 | Canola | mitochondrion, plastid | 61.74 | 52.42 |
| AT2G28000.1 | Thale cress | plastid | 46.31 | 47.1 |
| AT3G23990.1 | Thale cress | mitochondrion | 44.46 | 45.93 |
| AT2G33210.1 | Thale cress | mitochondrion | 43.62 | 44.44 |
| AT3G13860.1 | Thale cress | mitochondrion | 42.62 | 44.41 |
| AT5G18820.1 | Thale cress | plastid | 42.28 | 43.83 |
| Os02t0103100-01 | Rice | plasma membrane, vacuole | 0.34 | 1.37 |
Protein Annotations
| MapMan:1.1.8.1.6.2.2 | Gene3D:1.10.560.10 | MapMan:1.2.1.2.1.2 | MapMan:19.1.7.1 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 |
| EntrezGene:820549 | ProteinID:AEE75362.1 | ArrayExpress:AT3G13470 | EnsemblPlantsGene:AT3G13470 | RefSeq:AT3G13470 | TAIR:AT3G13470 |
| RefSeq:AT3G13470-TAIR-G | EnsemblPlants:AT3G13470.1 | TAIR:AT3G13470.1 | ProteinID:BAB01754.1 | InterPro:Chaperonin_Cpn60_CS | InterPro:Chaprnin_Cpn60 |
| ncoils:Coil | InterPro:Cpn60/TCP-1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006457 | GO:GO:0006458 |
| GO:GO:0007005 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0022626 | GO:GO:0042026 | GO:GO:0044183 | GO:GO:0051082 |
| GO:GO:0061077 | InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 | InterPro:IPR027410 | InterPro:IPR027413 |
| HAMAP:MF_00600 | RefSeq:NP_187956.1 | PFAM:PF00118 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00298 | ScanProsite:PS00296 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF164 | UniProt:Q9LJE4 |
| SUPFAM:SSF48592 | SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02348 | UniParc:UPI00000A7E60 |
| SEG:seg | : | : | : | : | : |
Description
CPN60B2Chaperonin 60 subunit beta 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJE4]
Coordinates
chr3:+:4389215..4393015
Molecular Weight (calculated)
63345.3 Da
IEP (calculated)
5.405
GRAVY (calculated)
-0.056
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTFTATSS LGSLLAPNAI KLSSATSISS SSFGRRHNVC VRRSRPAIVC AAKELHFNKD GTTIRKLQTG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
101: VNDGVTVARE VELEDPVENI GAKLVRQAAA KTNDLAGDGT TTSVVLAQGF IAEGVKVVAA GANPVLITRG IEKTAKALVN ELKLMSKEVE DSELADVAAV
201: SAGNNHEVGS MIAEAMSKVG RKGVVTLEEG KSAENNLYVV EGMQFDRGYI SPYFVTDSEK MSVEYDNCKL LLVDKKVTNA RDLVGVLEDA IRGGYPILII
301: AEDIEQEALA TLVVNKLRGT LKIAALKAPG FGERKSQYLD DIAILTGATV IREEVGLSLD KAGKEVLGNA SKVVLTKEMT TIVGDGTTQE AVNKRVVQIR
401: NLIEQAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK DTLENDEEKV GAEIVKRALS
501: YPLKLIAKNA GVNGSVVSEK VLANDNVKFG YNAATGKYED LMAAGIIDPT KVVRCCLEHA ASVAKTFLMS DCVVVEIPEP EPVPAGNPMD NSGYGY
101: VNDGVTVARE VELEDPVENI GAKLVRQAAA KTNDLAGDGT TTSVVLAQGF IAEGVKVVAA GANPVLITRG IEKTAKALVN ELKLMSKEVE DSELADVAAV
201: SAGNNHEVGS MIAEAMSKVG RKGVVTLEEG KSAENNLYVV EGMQFDRGYI SPYFVTDSEK MSVEYDNCKL LLVDKKVTNA RDLVGVLEDA IRGGYPILII
301: AEDIEQEALA TLVVNKLRGT LKIAALKAPG FGERKSQYLD DIAILTGATV IREEVGLSLD KAGKEVLGNA SKVVLTKEMT TIVGDGTTQE AVNKRVVQIR
401: NLIEQAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK DTLENDEEKV GAEIVKRALS
501: YPLKLIAKNA GVNGSVVSEK VLANDNVKFG YNAATGKYED LMAAGIIDPT KVVRCCLEHA ASVAKTFLMS DCVVVEIPEP EPVPAGNPMD NSGYGY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.