Factsheet for AT5G56500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32855	Canola	plastid	96.82	97.31
Bra028922.1-P	Field mustard	plastid	96.31	97.29
CDY11918	Canola	plastid	96.48	96.81
CDY36809	Canola	plastid	95.81	94.23
AT3G13470.1	Thale cress	plastid	86.93	87.08
PGSC0003DMT400061700	Potato	extracellular	87.1	86.81
Solyc01g028810.2.1	Tomato	plastid	87.1	86.81
VIT_06s0004g00240.t01	Wine grape	plastid	87.94	86.35
AT1G55490.3	Thale cress	plastid	86.77	86.33
KRH43861	Soybean	plastid	85.09	85.81
KRH13605	Soybean	nucleus	84.92	85.79
HORVU4Hr1G076680.1	Barley	cytosol	28.31	85.35
TraesCS6B01G012000.1	Wheat	cytosol	58.63	85.16
Zm00001d035937_P001	Maize	plastid	82.24	84.8
EER89076	Sorghum	plastid	81.91	84.46
HORVU5Hr1G074160.1	Barley	cytosol	27.47	84.1
HORVU2Hr1G107410.2	Barley	cytosol	27.97	83.5
GSMUA_Achr9P23240_001	Banana	plastid	85.09	83.01
Os06t0114000-02	Rice	plastid	83.25	82.7
GSMUA_Achr3P27620_001	Banana	plastid	84.76	82.68
HORVU7Hr1G006490.2	Barley	cytosol	76.72	82.67
TraesCS4A01G452700.2	Wheat	plastid	80.4	82.19
Zm00001d045544_P002	Maize	plastid	82.41	82.0
TraesCS6A01G006400.1	Wheat	golgi	82.08	81.94
TraesCS6D01G009100.1	Wheat	golgi	81.57	81.44
TraesCS6B01G011800.1	Wheat	plastid	80.4	80.94
Os02t0102900-01	Rice	plastid	81.07	80.94
TraesCS6B01G012100.3	Wheat	plastid	80.9	80.5
KXG29249	Sorghum	plastid	81.24	80.3
TraesCS7A01G036200.2	Wheat	golgi	82.24	79.19
TraesCS7D01G032800.1	Wheat	cytosol	82.24	78.06
Zm00001d054089_P002	Maize	plastid	80.07	77.47
TraesCS6B01G039300.2	Wheat	plastid	75.21	75.08
TraesCS6A01G028100.1	Wheat	plastid	75.04	74.92
TraesCS6D01G031400.1	Wheat	plastid	74.87	74.75
HORVU6Hr1G005220.3	Barley	plastid	74.54	74.41
Zm00001d016540_P001	Maize	cytosol	12.73	73.08
GSMUA_Achr11P...	Banana	plastid	84.09	72.13
HORVU6Hr1G000180.2	Barley	plastid	75.88	69.59
Zm00001d053279_P001	Maize	mitochondrion	18.26	69.43
HORVU4Hr1G066820.2	Barley	cytosol	27.3	69.36
Zm00001d046709_P001	Maize	mitochondrion	17.92	68.15
Zm00001d037526_P001	Maize	plastid	18.59	62.71
AT1G26230.1	Thale cress	plastid	62.14	60.72
AT2G28000.1	Thale cress	plastid	47.91	48.81
AT3G23990.1	Thale cress	mitochondrion	44.89	46.45
AT2G33210.1	Thale cress	mitochondrion	44.89	45.81
AT5G18820.1	Thale cress	plastid	42.71	44.35
AT3G13860.1	Thale cress	mitochondrion	42.38	44.23
Os02t0103100-01	Rice	plasma membrane, vacuole	0.34	1.37

Protein Annotations

MapMan:1.1.8.1.6.2.2	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.2	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
EntrezGene:835751	UniProt:A0A178UKH6	ProteinID:AED96773.1	ProteinID:AED96774.1	EMBL:AK228340	EMBL:AK319025
ArrayExpress:AT5G56500	EnsemblPlantsGene:AT5G56500	RefSeq:AT5G56500	TAIR:AT5G56500	RefSeq:AT5G56500-TAIR-G	EnsemblPlants:AT5G56500.2
TAIR:AT5G56500.2	Unigene:At.43152	ProteinID:BAB11583.1	UniProt:C0Z361	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005829	GO:GO:0006457	GO:GO:0006458	GO:GO:0007005	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0042026
GO:GO:0044183	GO:GO:0051082	GO:GO:0061077	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	HAMAP:MF_00600	RefSeq:NP_001032083.1	RefSeq:NP_200461.4	ProteinID:OAO94125.1
PFAM:PF00118	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PRINTS:PR00298
ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF164	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI00001970F7	SEG:seg	:	:

Description

CPN60B3Chaperonin 60 subunit beta 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:C0Z361]

Coordinates

chr5:+:22873666..22877404

Molecular Weight (calculated)

63328.1 Da

IEP (calculated)

5.566

GRAVY (calculated)

-0.102

Length

597 amino acids

Sequence
(BLAST)

001: MASTFSATSS MGSSLAPPSN RLSSFVSISS SSFGRTQSIA QRKARFPKIY AAKQLHFNKD GTAIKKLQAG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
101: VNDGVTVARE VELEDPVENI GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL IAEGVKVVAA GANPVLITRG IEKTTKALVA ELKKMSKEVE DSELADVAAV
201: SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV EGMQFDRGYI SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII
301: AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV IREEVGLQLE KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK
401: NLIEAAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK ETLANDEEKV GADIVKKALS
501: YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED LMAAGIIDPT KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.