Factsheet for HORVU5Hr1G074160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G076680.1	Barley	cytosol	92.82	91.41
HORVU2Hr1G107410.2	Barley	cytosol	90.77	88.5
HORVU4Hr1G066820.2	Barley	cytosol	79.49	65.96
CDY32775	Canola	cytosol	27.69	63.53
CDY10302	Canola	extracellular	14.36	43.08
HORVU2Hr1G109400.1	Barley	cytosol	20.0	42.39
CDX72433	Canola	endoplasmic reticulum	52.31	32.28
HORVU7Hr1G006490.2	Barley	cytosol	84.62	29.78
Os02t0102900-01	Rice	plastid	91.28	29.77
KXG29249	Sorghum	plastid	90.26	29.14
CDX75715	Canola	cytosol	81.03	28.06
Zm00001d054089_P002	Maize	plastid	88.72	28.04
GSMUA_Achr3P27620_001	Banana	plastid	87.69	27.94
HORVU6Hr1G005220.3	Barley	plastid	84.62	27.59
AT5G56500.2	Thale cress	plastid	84.1	27.47
Bra001507.1-P	Field mustard	plastid	83.08	27.46
GSMUA_Achr9P23240_001	Banana	plastid	86.15	27.45
Bra028922.1-P	Field mustard	plastid	83.08	27.41
KRH43861	Soybean	plastid	83.08	27.36
AT3G13470.1	Thale cress	plastid	83.59	27.35
CDX82537	Canola	plastid	82.05	27.26
KRH13605	Soybean	nucleus	82.56	27.24
CDY32855	Canola	plastid	82.05	26.94
CDY11918	Canola	plastid	82.05	26.89
AT1G55490.3	Thale cress	plastid	82.56	26.83
CDY08245	Canola	plastid	82.05	26.67
Bra011919.1-P	Field mustard	plastid	82.56	26.48
CDX75713	Canola	plastid	80.51	26.48
CDY36809	Canola	plastid	82.05	26.36
VIT_06s0004g00240.t01	Wine grape	plastid	82.05	26.32
VIT_09s0002g03930.t01	Wine grape	plastid	82.05	26.27
Solyc01g028810.2.1	Tomato	plastid	80.51	26.21
PGSC0003DMT400061700	Potato	extracellular	80.51	26.21
Solyc03g120850.2.1	Tomato	plastid	78.97	25.45
PGSC0003DMT400006501	Potato	plastid	78.97	25.45
CDY26100	Canola	plastid	81.54	25.32
HORVU2Hr1G011340.1	Barley	cytosol	21.03	24.85
Bra030858.1-P	Field mustard	cytosol	82.05	23.22
CDX86994	Canola	mitochondrion, plastid	83.08	23.08
CDY02438	Canola	cytosol	81.03	22.67
HORVU6Hr1G000180.2	Barley	plastid	74.36	22.27
CDY56074	Canola	plastid	53.85	22.11
CDY23605	Canola	cytosol	47.18	21.2
HORVU2Hr1G077410.18	Barley	plastid	58.46	19.19
CDY10557	Canola	endoplasmic reticulum, plastid	81.03	19.06
CDY43988	Canola	cytosol	48.72	18.48
Bra027431.1-P	Field mustard	cytosol	48.72	18.3
HORVU5Hr1G125130.1	Barley	plastid	49.23	16.35
HORVU2Hr1G007840.7	Barley	mitochondrion, plastid	47.69	14.9
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	44.1	14.8
HORVU4Hr1G078820.3	Barley	plastid	46.67	14.42
CDX85007	Canola	cytosol, plastid	73.85	14.34
HORVU0Hr1G038830.17	Barley	plastid	42.05	13.9
HORVU1Hr1G038680.8	Barley	mitochondrion	46.67	13.6
HORVU4Hr1G071510.2	Barley	cytosol	22.05	6.04
CDY40825	Canola	endoplasmic reticulum, vacuole	2.05	1.88
Os02t0103100-01	Rice	plasma membrane, vacuole	1.03	1.37

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A287RSS7	InterPro:Chaperone_TCP-1
InterPro:Chaperonin_Cpn60_CS	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU5Hr1G074160	EnsemblPlants:HORVU5Hr1G074160.1
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00296
PANTHER:PTHR11353	PANTHER:PTHR11353:SF102	SUPFAM:SSF48592	InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B47639C	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:542137096..542138705

Molecular Weight (calculated)

20968.1 Da

IEP (calculated)

5.153

GRAVY (calculated)

-0.132

Length

195 amino acids

Sequence
(BLAST)

001: CLHVIEHEYE KEKLNERIDK LSGGVAVIQV GAPTETELKE KKLRVEDTLN ATKAAVEEGI VVGGGCTLLR LASKVDAIKE TLENDEQKVG AEIVRKSLSY
101: PLKLTAKNAG VNGSVVTEKV LVNDNFRYGY NAATGKYEDL MAAGIIDPTK VVRCCLEHAA SVAKTFITSD VVVVDIKESE QAPATNPMVG SGYGF

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.