Factsheet for HORVU2Hr1G007840.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G009200.1	Wheat	mitochondrion, plastid	92.15	99.48
TraesCS2D01G049500.1	Wheat	golgi, plastid	91.83	99.13
HORVU2Hr1G109400.1	Barley	cytosol	14.42	97.83
HORVU2Hr1G011340.1	Barley	cytosol	25.48	96.36
Os12t0277500-01	Rice	plastid	86.22	93.08
EES19317	Sorghum	plastid	83.01	89.77
Zm00001d000399_P001	Maize	plastid	82.69	88.36
GSMUA_Achr11P...	Banana	plastid	79.17	84.3
Bra000498.1-P	Field mustard	mitochondrion	71.15	82.99
GSMUA_AchrUn_...	Banana	plastid	76.44	82.67
Solyc11g069790.1.1	Tomato	plastid	77.4	82.14
VIT_06s0061g00270.t01	Wine grape	plastid	76.92	81.91
KRH25068	Soybean	nucleus	76.28	81.51
CDY68896	Canola	cytosol	43.91	81.31
PGSC0003DMT400002933	Potato	cytosol, extracellular, plastid	76.28	80.95
CDX83280	Canola	plastid	75.16	80.58
AT2G28000.1	Thale cress	plastid	75.64	80.55
Bra011985.1-P	Field mustard	plastid	75.48	80.51
HORVU5Hr1G125130.1	Barley	plastid	75.32	80.07
CDY31190	Canola	plastid	75.0	79.86
Bra034383.1-P	Field mustard	plastid	74.84	79.83
CDY30514	Canola	plastid	74.52	79.49
CDY04527	Canola	plastid	75.48	79.03
CDX77147	Canola	plastid	75.48	75.72
CDX71396	Canola	plastid	63.94	75.43
Solyc06g075010.2.1	Tomato	plastid	70.83	75.04
KRH30612	Soybean	endoplasmic reticulum	70.99	74.7
PGSC0003DMT400031301	Potato	plastid	70.51	74.7
Zm00001d051252_P001	Maize	cytosol	23.4	71.22
HORVU0Hr1G038830.17	Barley	plastid	51.6	54.58
HORVU4Hr1G076680.1	Barley	cytosol	15.71	49.49
HORVU2Hr1G107410.2	Barley	cytosol	15.71	49.0
HORVU5Hr1G074160.1	Barley	cytosol	14.9	47.69
HORVU7Hr1G006490.2	Barley	cytosol	41.83	47.11
HORVU6Hr1G005220.3	Barley	plastid	44.87	46.82
HORVU4Hr1G066820.2	Barley	cytosol	16.35	43.4
HORVU6Hr1G000180.2	Barley	plastid	42.63	40.86
HORVU1Hr1G079910.1	Barley	mitochondrion, plasma membrane	37.18	39.93
HORVU2Hr1G077410.18	Barley	plastid	37.34	39.23
HORVU4Hr1G078820.3	Barley	plastid	39.26	38.83
HORVU1Hr1G038680.8	Barley	mitochondrion	39.9	37.22
HORVU4Hr1G071510.2	Barley	cytosol	21.63	18.96

Protein Annotations

MapMan:1.1.8.1.6.2.1	Gene3D:1.10.560.10	MapMan:1.2.1.2.1.1	MapMan:19.1.7.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10
UniProt:A0A287H0L0	InterPro:Chaperonin_Cpn60_CS	InterPro:Chaprnin_Cpn60	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0042026	InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU2Hr1G007840	EnsemblPlants:HORVU2Hr1G007840.7	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
HAMAP:MF_00600	PFAM:PF00118	PRINTS:PR00298	ScanProsite:PS00296	PANTHER:PTHR11353	PANTHER:PTHR11353:SF175
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02348	UniParc:UPI000B47214D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:16406961..16411125

Molecular Weight (calculated)

66392.8 Da

IEP (calculated)

5.506

GRAVY (calculated)

-0.093

Length

624 amino acids

Sequence
(BLAST)

001: PRNLIPKPPS LTLLPHQLPP PLLPPPYPHL SSAARSPHLR LRPQPPMASA NAISTASLLR SFSSQGRLRR SKNGRSSRLV VRADAKEIAF DQKSRAALQA
101: GVEKLANAVG VTLGPRGRNV VLDEHGNPKV VNDGVTIARA IELANPMENA GAALIREVAS KTNDSAGDGT TTACVLAREI IKLGILSVTS GANPVSLKKG
201: IDKTVQGLIE ELERKARPVK GSGDIKAVAS ISAGNDELIG AMIADAIDKV GPDGVLSIES SSSFETTVDV EEGMEIDRGY ISPQFVTNLE KSIVEFENAR
301: VLITDQKITS IKEIIPLLEQ TTQLRCPLFI VAEDITGEAL ATLVVNKLRG IINVAAIKAP SFGERRKAVL QDIAIVTGAE YLAKDLGLLV ENATVDQLGT
401: ARKITIHQTT TTLIADAASK DEIQARVAQL KKELSETDSI YDSEKLAERI AKLSGGVAVI KVGATTETEL EDRQLRIEDA KNATFAAIEE GIVPGGGAAY
501: VHLSTYVPAI KETIEDHDER LGADIIQKAL QAPASLIANN AGVEGEVVIE KIKDSEWEMG YNAMTDKYEN LIESGVIDPA KVTRCALQNA ASVSGMVLTT
601: QAIVVEKPKP KAKVAEPAEG QLSV

Best Arabidopsis Sequence Match ( AT1G55490.1 )
(BLAST)

001: MASTFTATSS IGSMVAPNGH KSDKKLISKL SSSSFGRRQS VCPRPRRSSS AIVCAAKELH FNKDGTTIRR LQAGVNKLAD LVGVTLGPKG RNVVLESKYG
101: SPRIVNDGVT VAREVELEDP VENIGAKLVR QAAAKTNDLA GDGTTTSVVL AQGFIAEGVK VVAAGANPVL ITRGIEKTAK ALVTELKKMS KEVEDSELAD
201: VAAVSAGNND EIGNMIAEAM SKVGRKGVVT LEEGKSAENN LYVVEGMQFD RGYISPYFVT DSEKMSVEFD NCKLLLVDKK ITNARDLVGV LEDAIRGGYP
301: ILIIAEDIEQ EALATLVVNK LRGTLKIAAL RAPGFGERKS QYLDDIAILT GATVIREEVG LSLDKAGKEV LGNASKVVLT KETSTIVGDG STQDAVKKRV
401: TQIKNLIEQA EQDYEKEKLN ERIAKLSGGV AVIQVGAQTE TELKEKKLRV EDALNATKAA VEEGIVVGGG CTLLRLASKV DAIKATLDND EEKVGADIVK
501: RALSYPLKLI AKNAGVNGSV VSEKVLSNDN VKFGYNAATG KYEDLMAAGI IDPTKVVRCC LEHAASVAKT FLMSDCVVVE IKEPEPVPVG NPMDNSGYGY

Arabidopsis Description

CPN60B1LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.