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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
 mitochondrion: 21043471
mitochondrion: 26136264
plastid: 26362323
msms PMID: 21043471 doi
RP Jacoby, AH Millar, NL Taylor
ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
msms PMID: 26362323 doi
X Li, C Hao, J Zhong, F Liu, J Cai, X Wang, Q Zhou, T Dai, W Cao, D Jiang
Faculty of Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegaard Allé 13, DK-2630, Taastrup, Denmark. fl@plen.ku.dk., Faculty of Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegaard Allé 13, DK-2630, Taastrup, Denmark. xili@plen.ku.dk., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. 429382882@qq.com., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. caijian@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. caow@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. jiangd@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. kayozhong@163.com., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. qinzhou@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. tingbod@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. xiaowang@njau.edu.cn., National Engineering and Technology Center for Information Agriculture / Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China. xili@plen.ku.dk.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G049500.1 Wheat golgi, plastid 99.65 99.65
HORVU2Hr1G109400.1 Barley cytosol 15.22 95.65
HORVU2Hr1G011340.1 Barley cytosol 27.16 95.15
Os12t0277500-01 Rice plastid 92.91 92.91
HORVU2Hr1G007840.7 Barley mitochondrion, plastid 99.48 92.15
EES19317 Sorghum plastid 89.79 89.95
Zm00001d000399_P001 Maize plastid 89.79 88.87
GSMUA_Achr11P... Banana plastid 85.29 84.13
Bra000498.1-P Field mustard mitochondrion 76.64 82.8
GSMUA_AchrUn_... Banana plastid 82.35 82.5
Solyc11g069790.1.1 Tomato plastid 83.91 82.48
VIT_06s0061g00270.t01 Wine grape plastid 82.87 81.74
KRH25068 Soybean nucleus 82.18 81.34
PGSC0003DMT400002933 Potato cytosol, extracellular, plastid 82.7 81.29
CDY68896 Canola cytosol 47.23 81.01
Bra011985.1-P Field mustard plastid 81.49 80.51
CDX83280 Canola plastid 80.97 80.41
AT2G28000.1 Thale cress plastid 81.49 80.38
CDY31190 Canola plastid 80.8 79.69
Bra034383.1-P Field mustard plastid 80.62 79.66
CDY30514 Canola plastid 80.28 79.32
CDY04527 Canola plastid 81.31 78.86
CDX77147 Canola plastid 81.31 75.56
CDX71396 Canola plastid 69.03 75.43
Solyc06g075010.2.1 Tomato plastid 76.47 75.04
KRH30612 Soybean endoplasmic reticulum 76.82 74.87
PGSC0003DMT400031301 Potato plastid 76.12 74.7
Zm00001d051252_P001 Maize cytosol 25.26 71.22
Protein Annotations
MapMan:1.1.8.1.6.2.1Gene3D:1.10.560.10MapMan:1.2.1.2.1.1MapMan:19.1.7.1Gene3D:3.30.260.10Gene3D:3.50.7.10
InterPro:Chaperonin_Cpn60_CSInterPro:Chaprnin_Cpn60ncoils:CoilInterPro:Cpn60/TCP-1GO:GO:0000003GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005576GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005829GO:GO:0005840GO:GO:0006457
GO:GO:0007275GO:GO:0008150GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009579
GO:GO:0009658GO:GO:0009790GO:GO:0009791GO:GO:0009793GO:GO:0009941GO:GO:0009987
GO:GO:0016020GO:GO:0016043GO:GO:0022626GO:GO:0042026GO:GO:0048046InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sfInterPro:IPR027409InterPro:IPR027410InterPro:IPR027413HAMAP:MF_00600PFAM:PF00118
PRINTS:PR00298ScanProsite:PS00296PANTHER:PTHR11353PANTHER:PTHR11353:SF175SUPFAM:SSF48592SUPFAM:SSF52029
SUPFAM:SSF54849InterPro:TCP-1-like_intermed_sfTIGRFAMs:TIGR02348EnsemblPlantsGene:TraesCSU01G009200EnsemblPlants:TraesCSU01G009200.1TIGR:cd03344
SEG:seg:::::
Description
No Description!
Coordinates
chrUn:+:12590494..12594190
Molecular Weight (calculated)
61370.6 Da
IEP (calculated)
4.837
GRAVY (calculated)
-0.056
Length
578 amino acids
Sequence
(BLAST)
001: MASANAISTA SLLRSFSSQG RLRRSKNGRS SRLVVRADAK EIAFDQKSRA ALQAGVEKLA NAVGVTLGPR GRNVVLDEYG NPKVVNDGVT IARAIELANP
101: MENAGAALIR EVASKTNDSA GDGTTTACVL AREIIKLGIL SVTSGANPVS LKKGIDKTVQ GLIEELERKA RPVKGSGDIK AVASISAGND ELIGAMIADA
201: IDKVGPDGVL SIESSSSFET TVDVEEGMEI DRGYISPQFV TNLEKSIVEF ENARVLITDQ KITSIKEIIP LLEQTTQLRC PLFIVAEDIT GEALATLVVN
301: KLRGIINVAA IKAPSFGERR KAVLQDIAIV TGAEYLAKDL GLLVENATVD QLGTARKITI HQTTTTLIAD AASKDEIQAR VAQLKKELSE TDSIYDSEKL
401: AERIAKLSGG VAVIKVGATT ETELEDRQLR IEDAKNATFA AIEEGIVPGG GAAYVHLSTY VPAIKETIED HDERLGADII QKALQAPASL IANNAGVEGE
501: VVIEKIKESE WEMGYNAMTD KYENLIESGV IDPAKVTRCA LQNAASVSGM VLTTQAIVVE KPKPKPKVAE PAEGQLSV
Best Arabidopsis Sequence Match ( AT2G28000.1 )
(BLAST)
001: MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI
101: ARAIELPNAM ENAGAALIRE VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR PVKGRDDIRA VASISAGNDD
201: LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG
301: EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET
401: DSVYDSEKLA ERIAKLSGGV AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA DERLGADIVQ KALLSPAALI
501: AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV
Arabidopsis Description
CPN60A1SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.